Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G050200.1 | Wheat | cytosol | 98.64 | 98.64 |
| HORVU5Hr1G011170.1 | Barley | cytosol | 94.31 | 94.31 |
| TraesCS5A01G046100.2 | Wheat | cytosol | 94.31 | 94.31 |
| Os12t0612100-01 | Rice | cytosol | 69.11 | 69.29 |
| KXG23983 | Sorghum | cytosol | 68.02 | 68.21 |
| GSMUA_Achr4P31690_001 | Banana | extracellular, vacuole | 41.46 | 41.35 |
| VIT_10s0003g05000.t01 | Wine grape | cytosol | 36.59 | 36.0 |
| TraesCS4D01G102200.1 | Wheat | cytosol | 29.54 | 25.29 |
| TraesCS5D01G122900.1 | Wheat | cytosol | 28.46 | 24.42 |
| TraesCS3D01G388200.1 | Wheat | cytosol | 22.49 | 24.2 |
Protein Annotations
| EnsemblPlants:TraesCS5D01G056000.1 | EnsemblPlantsGene:TraesCS5D01G056000 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016740 | GO:GO:0080048 |
| InterPro:GDPGP | PANTHER:PTHR20884 | PANTHER:PTHR20884:SF9 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr5D:+:52281618..52284618
Molecular Weight (calculated)
40874.6 Da
IEP (calculated)
4.970
GRAVY (calculated)
-0.041
Length
369 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSATKLEGG YCFHSKNSPL DQPEGVKIHL YRLGIEQREH DALKSFACAG EGSPSLLDTI ILSQWENFAQ KGQLGYDVTT CELKVIEGQR DFVIQMNDKW
101: NSFSLKKYDK FGHPFGCLKP NSARSYEELL LCIAEGENNE PEVVPSITPP NNGVLLIANA YPVEYGHIFL VPNATNQLSS FWDKRMFGLI TKIASEVNSA
201: AFRVFFDDGT SIVPKHMFFQ ACYFANPLPV ESSSTVALYD GATRSGICVS EIVDYPLKAL VFTSTNVNAL VDVVSEACLA LHENNTVHSL MMSNNGRNVF
301: LFPQVKNLVT GCCLSAWECC GYFVYHTKVD FDRASETGIS NRMASFSFQD GDFEDLKKLC CAIADGLVT
101: NSFSLKKYDK FGHPFGCLKP NSARSYEELL LCIAEGENNE PEVVPSITPP NNGVLLIANA YPVEYGHIFL VPNATNQLSS FWDKRMFGLI TKIASEVNSA
201: AFRVFFDDGT SIVPKHMFFQ ACYFANPLPV ESSSTVALYD GATRSGICVS EIVDYPLKAL VFTSTNVNAL VDVVSEACLA LHENNTVHSL MMSNNGRNVF
301: LFPQVKNLVT GCCLSAWECC GYFVYHTKVD FDRASETGIS NRMASFSFQD GDFEDLKKLC CAIADGLVT
001: MALPPYDPNF KFAFSLGTIA KHQDYDESAS AAVVALDLIS SARFALKLDS VYTEYSAKYV VDNAAGSHSG RKLTVKDCLE FALNKGGIPK AEDWPRLGSV
101: ITPPSSYKPD LVSMKGQVIE PQTIEEACDM VVDQPVGAKL HVFKPHIELQ QDASAITGIY CGTSGEPASY VGLRDAIIVG VEKIQGKSIG TVKVWYKKFI
201: FLKVAMSRWF QLYSPDGTHT GIKRTDYLVD FCVPRLSMD
101: ITPPSSYKPD LVSMKGQVIE PQTIEEACDM VVDQPVGAKL HVFKPHIELQ QDASAITGIY CGTSGEPASY VGLRDAIIVG VEKIQGKSIG TVKVWYKKFI
201: FLKVAMSRWF QLYSPDGTHT GIKRTDYLVD FCVPRLSMD
Arabidopsis Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G51670.1); Has 39 Blast hits to 39 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: /.../BLink). [Source:TAIR;Acc:AT1G48180]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.