Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G056000.1 | Wheat | cytosol | 94.31 | 94.31 |
| TraesCS5B01G050200.1 | Wheat | cytosol | 93.22 | 93.22 |
| HORVU5Hr1G011170.1 | Barley | cytosol | 91.6 | 91.6 |
| Os12t0612100-01 | Rice | cytosol | 69.65 | 69.84 |
| KXG23983 | Sorghum | cytosol | 67.75 | 67.93 |
| GSMUA_Achr4P31690_001 | Banana | extracellular, vacuole | 40.92 | 40.81 |
| VIT_10s0003g05000.t01 | Wine grape | cytosol | 36.59 | 36.0 |
| TraesCS4A01G201200.1 | Wheat | cytosol | 30.35 | 25.99 |
| TraesCS5A01G107800.2 | Wheat | cytosol | 29.54 | 25.35 |
| TraesCS3A01G394400.1 | Wheat | plastid | 23.31 | 21.66 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G046100.2 | EnsemblPlantsGene:TraesCS5A01G046100 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016740 | GO:GO:0080048 |
| InterPro:GDPGP | PANTHER:PTHR20884 | PANTHER:PTHR20884:SF9 | SEG:seg | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr5A:+:41424465..41427528
Molecular Weight (calculated)
41043.8 Da
IEP (calculated)
5.090
GRAVY (calculated)
-0.090
Length
369 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSATKLEGG YCFHSKNSPL DQPEGVKIHL YRLGIEQREH DALKSFAYAG QGSPSLLDTL ILSQWENFAQ KGHMGYDVTA CELKVIEGQR DFVIQMNDKW
101: NTFPLKKHDK FGHPFGCLKP NSAKSYEELL LCIAEGEDTE PEVVPSTTPP NNGVLLIANA YPVEYGHIFL VPNSTNQLSS FWDKRMFGLI TKIASEVNST
201: AFRVFFDDGT SIVPKHMFFQ ACYFANPLPV ESASTVALYD GATRSGICVS EIVDYPLKAL VFTSTNVNAL VDVVSEACLA LHEKNTVHSL MMSNNGRNVF
301: LFPQVKNLVT GCYLSAWECC GYFVYQTKVD FDRASETGIS NRMASFSFQD GEFEDLKKLC CAIADDLVT
101: NTFPLKKHDK FGHPFGCLKP NSAKSYEELL LCIAEGEDTE PEVVPSTTPP NNGVLLIANA YPVEYGHIFL VPNSTNQLSS FWDKRMFGLI TKIASEVNST
201: AFRVFFDDGT SIVPKHMFFQ ACYFANPLPV ESASTVALYD GATRSGICVS EIVDYPLKAL VFTSTNVNAL VDVVSEACLA LHEKNTVHSL MMSNNGRNVF
301: LFPQVKNLVT GCYLSAWECC GYFVYQTKVD FDRASETGIS NRMASFSFQD GEFEDLKKLC CAIADDLVT
001: MLKIKRVPTV VSNYQKDDGA EDPVGCGRNC LGACCLNGAR LPLYACKNLV KSGEKLVISH EAIEPPVAFL ESLVLGEWED RFQRGLFRYD VTACETKVIP
101: GKYGFVAQLN EGRHLKKRPT EFRVDKVLQS FDGSKFNFTK VGQEELLFQF EAGEDAQVQF FPCMPIDPEN SPSVVAINVS PIEYGHVLLI PRVLDCLPQR
201: IDHKSLLLAV HMAAEAANPY FRLGYNSLGA FATINHLHFQ AYYLAMPFPL EKAPTKKITT TVSGVKISEL LSYPVRSLLF EGGSSMQELS DTVSDCCVCL
301: QNNNIPFNIL ISDCGRQIFL MPQCYAEKQA LGEVSPEVLE TQVNPAVWEI SGHMVLKRKE DYEGASEDNA WRLLAEASLS EERFKEVTAL AFEAIGCSNQ
401: EEDLEGTIVH QQNSSGNVNQ KSNRTHGGPI TNGTAAECLV LQ
101: GKYGFVAQLN EGRHLKKRPT EFRVDKVLQS FDGSKFNFTK VGQEELLFQF EAGEDAQVQF FPCMPIDPEN SPSVVAINVS PIEYGHVLLI PRVLDCLPQR
201: IDHKSLLLAV HMAAEAANPY FRLGYNSLGA FATINHLHFQ AYYLAMPFPL EKAPTKKITT TVSGVKISEL LSYPVRSLLF EGGSSMQELS DTVSDCCVCL
301: QNNNIPFNIL ISDCGRQIFL MPQCYAEKQA LGEVSPEVLE TQVNPAVWEI SGHMVLKRKE DYEGASEDNA WRLLAEASLS EERFKEVTAL AFEAIGCSNQ
401: EEDLEGTIVH QQNSSGNVNQ KSNRTHGGPI TNGTAAECLV LQ
Arabidopsis Description
VTC2GDP-L-galactose phosphorylase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWE8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.