Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- extracellular 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU5Hr1G100430.1 | Barley | mitochondrion | 70.29 | 63.64 |
| HORVU5Hr1G075160.1 | Barley | plastid | 69.87 | 53.7 |
| TraesCS3D01G388200.1 | Wheat | cytosol | 70.71 | 49.27 |
| Os01t0901300-01 | Rice | cytosol | 26.78 | 43.54 |
| TraesCS3A01G394400.1 | Wheat | plastid | 70.71 | 42.57 |
| TraesCS3B01G426400.3 | Wheat | plastid | 70.29 | 42.32 |
| HORVU3Hr1G089030.13 | Barley | plastid | 71.97 | 41.55 |
| KXG33927 | Sorghum | plastid | 64.44 | 39.59 |
| Zm00001d042478_P003 | Maize | plastid | 64.02 | 39.23 |
| HORVU4Hr1G017030.1 | Barley | cytosol | 45.61 | 25.29 |
| HORVU5Hr1G031870.1 | Barley | cytosol | 45.19 | 25.0 |
| GSMUA_Achr6P13510_001 | Banana | cytosol, endoplasmic reticulum, plastid | 44.77 | 21.79 |
| HORVU5Hr1G011170.1 | Barley | cytosol | 20.08 | 13.01 |
| HORVU6Hr1G054830.1 | Barley | cytosol | 2.09 | 4.76 |
Protein Annotations
| EnsemblPlants:HORVU6Hr1G083130.2 | EnsemblPlantsGene:HORVU6Hr1G083130 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016740 | GO:GO:0080048 |
| InterPro:GDPGP | PANTHER:PTHR20884 | PANTHER:PTHR20884:SF11 | UniParc:UPI000B47AB94 | UniProt:A0A287UY39 | MapMan:10.3.1.5 |
Description
No Description!
Coordinates
chrchr6H:+:550487759..550489170
Molecular Weight (calculated)
26866.4 Da
IEP (calculated)
7.379
GRAVY (calculated)
-0.095
Length
239 amino acids
Sequence
(BLAST)
(BLAST)
001: DLPWRFLCRR APIPLLFAPL SLRSAVPMLS LSSPNDKVLP GEQNFVATLI ERRDRKKQPT EFGMNQVLQP FHSEKFNFTK VKPEEVIFRF QETENDSAQY
101: FDGAPPTVSA SPSSILINVS PIGYCHVLLI PQVQEYLPQR VDQESFLLAM YVTKEARNTF FRVGYNSLGA FATINHAYYL KVQYPVEKAP TEGLTFIGNG
201: VGISQLVKYP VSGFVFEGGA GLEDLSQGCL KCMYLLARE
101: FDGAPPTVSA SPSSILINVS PIGYCHVLLI PQVQEYLPQR VDQESFLLAM YVTKEARNTF FRVGYNSLGA FATINHAYYL KVQYPVEKAP TEGLTFIGNG
201: VGISQLVKYP VSGFVFEGGA GLEDLSQGCL KCMYLLARE
001: MLKIKRVPTV VSNYQKDDGA EDPVGCGRNC LGACCLNGAR LPLYACKNLV KSGEKLVISH EAIEPPVAFL ESLVLGEWED RFQRGLFRYD VTACETKVIP
101: GKYGFVAQLN EGRHLKKRPT EFRVDKVLQS FDGSKFNFTK VGQEELLFQF EAGEDAQVQF FPCMPIDPEN SPSVVAINVS PIEYGHVLLI PRVLDCLPQR
201: IDHKSLLLAV HMAAEAANPY FRLGYNSLGA FATINHLHFQ AYYLAMPFPL EKAPTKKITT TVSGVKISEL LSYPVRSLLF EGGSSMQELS DTVSDCCVCL
301: QNNNIPFNIL ISDCGRQIFL MPQCYAEKQA LGEVSPEVLE TQVNPAVWEI SGHMVLKRKE DYEGASEDNA WRLLAEASLS EERFKEVTAL AFEAIGCSNQ
401: EEDLEGTIVH QQNSSGNVNQ KSNRTHGGPI TNGTAAECLV LQ
101: GKYGFVAQLN EGRHLKKRPT EFRVDKVLQS FDGSKFNFTK VGQEELLFQF EAGEDAQVQF FPCMPIDPEN SPSVVAINVS PIEYGHVLLI PRVLDCLPQR
201: IDHKSLLLAV HMAAEAANPY FRLGYNSLGA FATINHLHFQ AYYLAMPFPL EKAPTKKITT TVSGVKISEL LSYPVRSLLF EGGSSMQELS DTVSDCCVCL
301: QNNNIPFNIL ISDCGRQIFL MPQCYAEKQA LGEVSPEVLE TQVNPAVWEI SGHMVLKRKE DYEGASEDNA WRLLAEASLS EERFKEVTAL AFEAIGCSNQ
401: EEDLEGTIVH QQNSSGNVNQ KSNRTHGGPI TNGTAAECLV LQ
Arabidopsis Description
VTC2GDP-L-galactose phosphorylase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWE8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.