Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G394400.1 | Wheat | plastid | 92.95 | 92.95 |
| TraesCS3D01G388200.1 | Wheat | cytosol | 79.6 | 92.13 |
| HORVU6Hr1G054830.1 | Barley | cytosol | 23.43 | 88.57 |
| HORVU3Hr1G089030.13 | Barley | plastid | 90.18 | 86.47 |
| HORVU5Hr1G075160.1 | Barley | plastid | 60.45 | 77.17 |
| KXG33927 | Sorghum | plastid | 70.03 | 71.47 |
| HORVU6Hr1G083130.2 | Barley | extracellular | 42.32 | 70.29 |
| Zm00001d042478_P003 | Maize | plastid | 68.77 | 70.0 |
| HORVU5Hr1G100430.1 | Barley | mitochondrion | 44.33 | 66.67 |
| Os01t0901300-01 | Rice | cytosol | 24.18 | 65.31 |
| TraesCS4B01G105300.2 | Wheat | cytosol | 49.62 | 45.71 |
| TraesCS5B01G111700.2 | Wheat | cytosol | 48.87 | 45.12 |
| GSMUA_Achr6P13510_001 | Banana | cytosol, endoplasmic reticulum, plastid | 52.14 | 42.16 |
| TraesCS5B01G050200.1 | Wheat | cytosol | 21.66 | 23.31 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G426400.3 | EnsemblPlantsGene:TraesCS3B01G426400 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016740 | GO:GO:0080048 |
| InterPro:GDPGP | PANTHER:PTHR20884 | PANTHER:PTHR20884:SF11 | SEG:seg | MapMan:10.3.1.5 | : |
Description
No Description!
Coordinates
chr3B:-:664888763..664890854
Molecular Weight (calculated)
45006.6 Da
IEP (calculated)
6.438
GRAVY (calculated)
-0.255
Length
397 amino acids
Sequence
(BLAST)
(BLAST)
001: MPVISPLPFS LAPTPAAPAA SRARWNSFLH HWRLRVETKA GMCSNGFDST NCLRMEEVEP NLSPFLHKLF KEWDDRNARG LFHHDITTSE AKVLPGEHNF
101: VATLIEGRDQ KKRPTEFGMN QVLQPFHSEK FNFTKVKPEE VIFRFQETEN DSAQYFDGTP PTVSASPSCI LINVSPIGYC HVLLTPQIQE CLPQRVDQES
201: FLLAMYVARE ARNPFFRVGY NSLGAFATIN HLHFQAYYLK VQYPVENAPT ERITVVRNGV SISQLVRYPV SGFVFEGGAS LEDLSQAVSD ACIFLQENNR
301: PFNVLISESG KRVFLLLQCY AEKQASGKAS QEFLDMRINP AVWELSGHLV LKRRKDYDEA SEATLCRFLV EASLSEAEFQ ELKRCLLEFL ATASPEK
101: VATLIEGRDQ KKRPTEFGMN QVLQPFHSEK FNFTKVKPEE VIFRFQETEN DSAQYFDGTP PTVSASPSCI LINVSPIGYC HVLLTPQIQE CLPQRVDQES
201: FLLAMYVARE ARNPFFRVGY NSLGAFATIN HLHFQAYYLK VQYPVENAPT ERITVVRNGV SISQLVRYPV SGFVFEGGAS LEDLSQAVSD ACIFLQENNR
301: PFNVLISESG KRVFLLLQCY AEKQASGKAS QEFLDMRINP AVWELSGHLV LKRRKDYDEA SEATLCRFLV EASLSEAEFQ ELKRCLLEFL ATASPEK
001: MLKIKRVPTV VSNYQKDDGA EDPVGCGRNC LGACCLNGAR LPLYACKNLV KSGEKLVISH EAIEPPVAFL ESLVLGEWED RFQRGLFRYD VTACETKVIP
101: GKYGFVAQLN EGRHLKKRPT EFRVDKVLQS FDGSKFNFTK VGQEELLFQF EAGEDAQVQF FPCMPIDPEN SPSVVAINVS PIEYGHVLLI PRVLDCLPQR
201: IDHKSLLLAV HMAAEAANPY FRLGYNSLGA FATINHLHFQ AYYLAMPFPL EKAPTKKITT TVSGVKISEL LSYPVRSLLF EGGSSMQELS DTVSDCCVCL
301: QNNNIPFNIL ISDCGRQIFL MPQCYAEKQA LGEVSPEVLE TQVNPAVWEI SGHMVLKRKE DYEGASEDNA WRLLAEASLS EERFKEVTAL AFEAIGCSNQ
401: EEDLEGTIVH QQNSSGNVNQ KSNRTHGGPI TNGTAAECLV LQ
101: GKYGFVAQLN EGRHLKKRPT EFRVDKVLQS FDGSKFNFTK VGQEELLFQF EAGEDAQVQF FPCMPIDPEN SPSVVAINVS PIEYGHVLLI PRVLDCLPQR
201: IDHKSLLLAV HMAAEAANPY FRLGYNSLGA FATINHLHFQ AYYLAMPFPL EKAPTKKITT TVSGVKISEL LSYPVRSLLF EGGSSMQELS DTVSDCCVCL
301: QNNNIPFNIL ISDCGRQIFL MPQCYAEKQA LGEVSPEVLE TQVNPAVWEI SGHMVLKRKE DYEGASEDNA WRLLAEASLS EERFKEVTAL AFEAIGCSNQ
401: EEDLEGTIVH QQNSSGNVNQ KSNRTHGGPI TNGTAAECLV LQ
Arabidopsis Description
VTC2GDP-L-galactose phosphorylase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWE8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.