Factsheet for Os03t0239400-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU92933	Sorghum	nucleus	87.99	88.22
HORVU4Hr1G064120.18	Barley	nucleus	83.55	79.21
TraesCS4B01G229100.2	Wheat	nucleus	83.55	79.21
TraesCS4D01G230200.3	Wheat	nucleus	83.29	78.96
TraesCS4A01G073000.4	Wheat	nucleus	82.77	78.47
Zm00001d047967_P003	Maize	nucleus	75.98	68.79
Zm00001d028372_P005	Maize	nucleus	85.64	54.13
Os02t0128200-01	Rice	nucleus	38.9	42.94
Os12t0233800-02	Rice	nucleus	30.55	37.62
Os05t0569300-01	Rice	nucleus	30.55	30.79
Os01t0658900-01	Rice	nucleus	26.63	28.33
Os07t0209800-01	Rice	nucleus	27.15	26.8
Os03t0809200-01	Rice	cytosol, nucleus	5.22	20.41

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	EntrezGene:4332201	ProteinID:ABF94876.1	EMBL:AK066563	ProteinID:BAF11420.1
ProteinID:BAS83182.1	ncoils:Coil	ProteinID:EAZ26216.1	GO:GO:0003674	GO:GO:0003700	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR004827
InterPro:MFMR	EnsemblPlantsGene:Os03g0239400	EnsemblPlants:Os03t0239400-01	PFAM:PF00170	PFAM:PF07777	PFAM:PF16596
ScanProsite:PS00036	PFscan:PS50217	PANTHER:PTHR22952	PANTHER:PTHR22952:SF142	UniProt:Q10PC3	SMART:SM00338
SUPFAM:SSF57959	UniParc:UPI0000DB4901	RefSeq:XP_015632857.1	RefSeq:XP_015632858.1	RefSeq:XP_015632859.1	RefSeq:XP_015632860.1
RefSeq:XP_015632861.1	InterPro:bZIP	SEG:seg	:	:	:

Description

b-ZIP TRANSCRIPTION FACTOR 26Similar to Transcription factor HBP-1a(C14). (Os03t0239400-01)

Coordinates

chr3:-:7358092..7369614

Molecular Weight (calculated)

41060.5 Da

IEP (calculated)

9.808

GRAVY (calculated)

-1.052

Length

383 amino acids

Sequence
(BLAST)

001: MGKGEVATRS KSQKSSATQN EQSTPTNPPT AYPDWSQFQA YYNPAGTAPM TPPGFFHPNV APSPQGHPYM WGPQMMPPYG TPPPYAAMYA QGTPYQQAPM
101: LPGSHPYNPY PGQSPNGTVQ TPTSAGGTET DKSGKSKRKT PLKRSKGSLG NLDVVATKNK KAPAKPSASS SNEGSSHSES GSGSSSEGSS TNSKSGSRTK
201: DGSEHGQGND ASNKGATAQS SAVEPVQAST GPVVLNPMMP YWPVPPPMAG PATGVNMGMD YWGTPTSVPM HNKVIAAPAS APSSNSRDVV LSDPAIQDER
301: ELKRQKRKQS NRESARRSRL RKQAEWEEVA NRADLLKQEN SSLKEELKQL QEKCNSLTSE NTTLHEKLKE LEGEKSNGNW YKE

Best Arabidopsis Sequence Match ( AT2G35530.1 )
(BLAST)

001: MASNEMEKSS KEKEPKTPPP SSTAPPSSQE PSSAVSAGMA TPDWSGFQAY SPMPPPHGYV ASSPQPHPYM WGVQHMMPPY GTPPHPYVAM YPPGGMYAHP
101: SMPPGSYPYS PYAMPSPNGM TEVSGNTTGG TDGDAKQSEV KEKLPIKRSR GSLGSLNMIT GKNNEPGKNS GASANGAYSK SGESASDGSS EGSDGNSQND
201: SGSGLDGKDA EAASENGGSA NGPQNGSAGT PILPVSQTVP IMPMTAAGVP GPPTNLNIGM DYWGAPTSAG IPGMHGKVST PVPGVVAPGS RDGGHSQPWL
301: QDDRELKRQR RKQSNRESAR RSRLRKQAEC DELAQRAEVL NEENTNLRAE INKLKSQCEE LTTENTSLKD QLSLFPPLEG ISMDNDHQEP DTNQTGAAER
401: KVDSYKDST

Arabidopsis Description

BZIP16bZIP transcription factor 16 [Source:UniProtKB/Swiss-Prot;Acc:Q501B2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.