Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- nucleus 3
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS4A01G073000.4 | Wheat | nucleus | 98.02 | 98.02 |
TraesCS4B01G229100.2 | Wheat | nucleus | 97.52 | 97.52 |
HORVU4Hr1G064120.18 | Barley | nucleus | 97.03 | 97.03 |
OQU92933 | Sorghum | nucleus | 80.45 | 85.08 |
Os03t0239400-01 | Rice | nucleus | 78.96 | 83.29 |
Zm00001d047967_P003 | Maize | nucleus | 68.56 | 65.48 |
Zm00001d028372_P005 | Maize | nucleus | 77.48 | 51.65 |
TraesCS5D01G124600.1 | Wheat | nucleus | 37.87 | 39.43 |
TraesCS1D01G417100.1 | Wheat | nucleus | 27.48 | 27.61 |
TraesCS2D01G236200.3 | Wheat | nucleus | 24.26 | 25.86 |
TraesCS5D01G473000.1 | Wheat | nucleus | 22.03 | 24.59 |
Protein Annotations
Gene3D:1.20.5.170 | MapMan:15.5.4.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 |
GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR004827 |
InterPro:MFMR | PFAM:PF00170 | PFAM:PF07777 | PFAM:PF16596 | ScanProsite:PS00036 | PFscan:PS50217 |
PANTHER:PTHR22952 | PANTHER:PTHR22952:SF142 | SMART:SM00338 | SUPFAM:SSF57959 | EnsemblPlantsGene:TraesCS4D01G230200 | EnsemblPlants:TraesCS4D01G230200.3 |
InterPro:bZIP | TIGR:cd14702 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr4D:+:390264477..390269197
Molecular Weight (calculated)
43484.6 Da
IEP (calculated)
9.360
GRAVY (calculated)
-0.877
Length
404 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKGDVATRS KSQKSSTAQV CVNKLNCMSN YCHYLTLFYL FQNEQSTPTN PPTAYPDWSQ FQAYYNVPGT TQMTPPAYFH STVAPSPQGH PYMWGPQMMP
101: PYGTPPPYAT MYAQGTPYQQ APMPPGSHPY SPYPVQAPNG TVQTPTSGAG GSETDKSNKN KRKTPLKRSK GSLGSLDVVT VKDKTPPAKP LVSSSNEGSS
201: QSESGSGSYS GGSSTNSKSG SHTKDGSEHG PANDASNKGV TAQGTAVEPT QVSSGPVVLN PMMPYWPVPP PMPGQATGVS MGVDYWGAPT SVPMHGKAVA
301: APTSAPSSNS RDIVLSDPVI QDEREVKKQK RKQSNRESAR RSRLRKQAEW EEVASRADLL KQENSSLKEE LKQLQEKCDN LTSENTSLHE KLKALDSEKP
401: NGNL
101: PYGTPPPYAT MYAQGTPYQQ APMPPGSHPY SPYPVQAPNG TVQTPTSGAG GSETDKSNKN KRKTPLKRSK GSLGSLDVVT VKDKTPPAKP LVSSSNEGSS
201: QSESGSGSYS GGSSTNSKSG SHTKDGSEHG PANDASNKGV TAQGTAVEPT QVSSGPVVLN PMMPYWPVPP PMPGQATGVS MGVDYWGAPT SVPMHGKAVA
301: APTSAPSSNS RDIVLSDPVI QDEREVKKQK RKQSNRESAR RSRLRKQAEW EEVASRADLL KQENSSLKEE LKQLQEKCDN LTSENTSLHE KLKALDSEKP
401: NGNL
001: MGSSEMEKSG KEKEPKTTPP STSSSAPATV VSQEPSSAVS AGVAVTQDWS GFQAYSPMPP HGYVASSPQP HPYMWGVQHM MPPYGTPPHP YVTMYPPGGM
101: YAHPSLPPGS YPYSPYAMPS PNGMAEASGN TGSVIEGDGK PSDGKEKLPI KRSKGSLGSL NMIIGKNNEA GKNSGASANG ACSKSAESGS DGSSDGSDAN
201: SQNDSGSRHN GKDGETASES GGSAHGPPRN GSNLPVNQTV AIMPVSATGV PGPPTNLNIG MDYWSGHGNV SGAVPGVVVD GSQSQPWLQV SDEREIKRQR
301: RKQSNRESAR RSRLRKQAEC DELAQRAEVL NGENSSLRAE INKLKSQYEE LLAENSSLKN KFSSAPSLEG GDLDKNEQEP QRSTRQDVA
101: YAHPSLPPGS YPYSPYAMPS PNGMAEASGN TGSVIEGDGK PSDGKEKLPI KRSKGSLGSL NMIIGKNNEA GKNSGASANG ACSKSAESGS DGSSDGSDAN
201: SQNDSGSRHN GKDGETASES GGSAHGPPRN GSNLPVNQTV AIMPVSATGV PGPPTNLNIG MDYWSGHGNV SGAVPGVVVD GSQSQPWLQV SDEREIKRQR
301: RKQSNRESAR RSRLRKQAEC DELAQRAEVL NGENSSLRAE INKLKSQYEE LLAENSSLKN KFSSAPSLEG GDLDKNEQEP QRSTRQDVA
Arabidopsis Description
BZIP68bZIP transcription factor 68 [Source:UniProtKB/Swiss-Prot;Acc:Q84LG2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.