Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G122000.2 | Wheat | nucleus | 99.48 | 99.48 |
| TraesCS5A01G115300.2 | Wheat | nucleus | 99.23 | 99.23 |
| HORVU5Hr1G029130.19 | Barley | nucleus | 83.51 | 83.29 |
| KXG23316 | Sorghum | nucleus | 79.64 | 80.26 |
| Zm00001d041142_P010 | Maize | nucleus | 77.32 | 78.53 |
| Os12t0233800-02 | Rice | nucleus | 62.11 | 77.49 |
| Zm00001d024041_P002 | Maize | nucleus | 59.02 | 66.57 |
| GSMUA_Achr4P04530_001 | Banana | nucleus | 62.11 | 58.35 |
| GSMUA_Achr4P11610_001 | Banana | nucleus | 41.75 | 54.36 |
| GSMUA_Achr5P14150_001 | Banana | nucleus | 55.93 | 53.98 |
| GSMUA_AchrUn_... | Banana | nucleus | 52.84 | 53.81 |
| Solyc08g076100.2.1 | Tomato | nucleus | 56.44 | 53.55 |
| VIT_02s0012g02250.t01 | Wine grape | nucleus | 56.96 | 53.51 |
| Solyc08g005290.2.1 | Tomato | nucleus | 54.64 | 53.4 |
| KRH74331 | Soybean | nucleus | 56.7 | 53.01 |
| AT1G32150.1 | Thale cress | nucleus | 53.09 | 52.96 |
| KRH39598 | Soybean | nucleus | 56.44 | 52.9 |
| GSMUA_Achr6P01090_001 | Banana | nucleus | 54.9 | 51.57 |
| KRH07569 | Soybean | nucleus | 55.15 | 51.44 |
| KRH45342 | Soybean | nucleus | 54.9 | 51.08 |
| CDY31695 | Canola | nucleus | 51.8 | 50.89 |
| CDY12261 | Canola | nucleus | 49.74 | 50.66 |
| CDY22589 | Canola | nucleus | 49.74 | 50.39 |
| GSMUA_Achr4P18980_001 | Banana | nucleus | 52.32 | 50.37 |
| AT2G35530.1 | Thale cress | nucleus | 52.84 | 50.12 |
| Bra023243.1-P | Field mustard | nucleus | 45.1 | 49.72 |
| GSMUA_Achr4P27400_001 | Banana | nucleus | 52.32 | 49.39 |
| PGSC0003DMT400047522 | Potato | nucleus | 48.45 | 48.83 |
| CDY40465 | Canola | nucleus | 37.37 | 48.33 |
| Bra005335.1-P | Field mustard | nucleus | 52.06 | 47.87 |
| Bra023012.1-P | Field mustard | nucleus | 47.68 | 45.91 |
| CDY65764 | Canola | nucleus | 47.16 | 45.64 |
| CDX84198 | Canola | nucleus | 52.06 | 44.01 |
| CDX84103 | Canola | nucleus, plastid | 35.57 | 39.88 |
| Bra017316.1-P | Field mustard | nucleus | 26.55 | 39.02 |
| TraesCS4D01G230200.3 | Wheat | nucleus | 39.43 | 37.87 |
| CDY32123 | Canola | nucleus | 14.18 | 35.95 |
| TraesCS2D01G236200.3 | Wheat | nucleus | 28.35 | 29.02 |
| TraesCS1D01G417100.1 | Wheat | nucleus | 29.12 | 28.11 |
| TraesCS5D01G473000.1 | Wheat | nucleus | 25.52 | 27.35 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR004827 |
| InterPro:MFMR | PFAM:PF00170 | PFAM:PF07777 | PFAM:PF16596 | ScanProsite:PS00036 | PFscan:PS50217 |
| PANTHER:PTHR22952 | PANTHER:PTHR22952:SF47 | SMART:SM00338 | SUPFAM:SSF57959 | EnsemblPlantsGene:TraesCS5D01G124600 | EnsemblPlants:TraesCS5D01G124600.1 |
| InterPro:bZIP | TIGR:cd14702 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr5D:+:189250572..189267587
Molecular Weight (calculated)
41299.4 Da
IEP (calculated)
6.803
GRAVY (calculated)
-1.009
Length
388 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSSEAETPA KANKASAPQE QQPPATSSTA TPTVYPDWTS FQGYPPIPPH GFFPSPVVSN PQGHPYMWGP QPMMPPYGSP PYVIYPPGGI YAHPSMRPGA
101: HPFAPYTMTS PNGNPDAAGT TTTAATAGGE TNGKSSEGKE KSPIKRSKGS LGSLNMITGK NCVEHGKTSG ASANGTISQS GESGSESSSE GSEANSQNDS
201: QHKESGQEQD GDVRSSQNGV SPSPSQAQLK QTLAIMQMPS SGPVPGPTTN LNIGMDYWAN TASSSPALHG KVTPTAIPGA VAPTEPWMQD ERELKRQKRK
301: QSNRDSARRS RLRKQAECEE LAQRAEVLKQ ENASLKDEVS RIRKEYDELL SKNSSLKDNV GDKQHKTDEA GLDNKLQHSG DDSQKDTN
101: HPFAPYTMTS PNGNPDAAGT TTTAATAGGE TNGKSSEGKE KSPIKRSKGS LGSLNMITGK NCVEHGKTSG ASANGTISQS GESGSESSSE GSEANSQNDS
201: QHKESGQEQD GDVRSSQNGV SPSPSQAQLK QTLAIMQMPS SGPVPGPTTN LNIGMDYWAN TASSSPALHG KVTPTAIPGA VAPTEPWMQD ERELKRQKRK
301: QSNRDSARRS RLRKQAECEE LAQRAEVLKQ ENASLKDEVS RIRKEYDELL SKNSSLKDNV GDKQHKTDEA GLDNKLQHSG DDSQKDTN
001: MASNEMEKSS KEKEPKTPPP SSTAPPSSQE PSSAVSAGMA TPDWSGFQAY SPMPPPHGYV ASSPQPHPYM WGVQHMMPPY GTPPHPYVAM YPPGGMYAHP
101: SMPPGSYPYS PYAMPSPNGM TEVSGNTTGG TDGDAKQSEV KEKLPIKRSR GSLGSLNMIT GKNNEPGKNS GASANGAYSK SGESASDGSS EGSDGNSQND
201: SGSGLDGKDA EAASENGGSA NGPQNGSAGT PILPVSQTVP IMPMTAAGVP GPPTNLNIGM DYWGAPTSAG IPGMHGKVST PVPGVVAPGS RDGGHSQPWL
301: QDDRELKRQR RKQSNRESAR RSRLRKQAEC DELAQRAEVL NEENTNLRAE INKLKSQCEE LTTENTSLKD QLSLFPPLEG ISMDNDHQEP DTNQTGAAER
401: KVDSYKDST
101: SMPPGSYPYS PYAMPSPNGM TEVSGNTTGG TDGDAKQSEV KEKLPIKRSR GSLGSLNMIT GKNNEPGKNS GASANGAYSK SGESASDGSS EGSDGNSQND
201: SGSGLDGKDA EAASENGGSA NGPQNGSAGT PILPVSQTVP IMPMTAAGVP GPPTNLNIGM DYWGAPTSAG IPGMHGKVST PVPGVVAPGS RDGGHSQPWL
301: QDDRELKRQR RKQSNRESAR RSRLRKQAEC DELAQRAEVL NEENTNLRAE INKLKSQCEE LTTENTSLKD QLSLFPPLEG ISMDNDHQEP DTNQTGAAER
401: KVDSYKDST
Arabidopsis Description
BZIP16bZIP transcription factor 16 [Source:UniProtKB/Swiss-Prot;Acc:Q501B2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.