Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G019200.1 | Wheat | nucleus | 97.69 | 98.26 |
| HORVU6Hr1G016240.10 | Barley | nucleus | 99.14 | 97.45 |
| TraesCS6B01G110100.1 | Wheat | nucleus | 97.69 | 97.13 |
| Os02t0128200-01 | Rice | nucleus | 75.5 | 75.5 |
| EES04440 | Sorghum | nucleus | 72.62 | 72.0 |
| Zm00001d053967_P001 | Maize | nucleus | 60.52 | 66.88 |
| Zm00001d015118_P001 | Maize | nucleus | 55.62 | 66.55 |
| Zm00001d039206_P001 | Maize | nucleus | 39.48 | 65.87 |
| GSMUA_Achr4P11610_001 | Banana | nucleus | 42.36 | 49.33 |
| TraesCS5A01G115300.2 | Wheat | nucleus | 53.31 | 47.68 |
| VIT_02s0012g02250.t01 | Wine grape | nucleus | 55.04 | 46.25 |
| GSMUA_Achr4P04530_001 | Banana | nucleus | 54.47 | 45.76 |
| Solyc08g076100.2.1 | Tomato | nucleus | 53.31 | 45.23 |
| Solyc08g005290.2.1 | Tomato | nucleus | 51.59 | 45.09 |
| KRH07569 | Soybean | nucleus | 53.6 | 44.71 |
| KRH39598 | Soybean | nucleus | 53.31 | 44.69 |
| KRH74331 | Soybean | nucleus | 53.03 | 44.34 |
| GSMUA_Achr5P14150_001 | Banana | nucleus | 51.01 | 44.03 |
| KRH45342 | Soybean | nucleus | 51.59 | 42.93 |
| GSMUA_AchrUn_... | Banana | nucleus | 46.97 | 42.78 |
| PGSC0003DMT400047522 | Potato | nucleus | 45.82 | 41.3 |
| GSMUA_Achr6P01090_001 | Banana | nucleus | 48.99 | 41.16 |
| AT1G32150.1 | Thale cress | nucleus | 46.11 | 41.13 |
| CDY31695 | Canola | nucleus | 46.4 | 40.76 |
| GSMUA_Achr4P18980_001 | Banana | nucleus | 47.26 | 40.69 |
| GSMUA_Achr4P27400_001 | Banana | nucleus | 48.13 | 40.63 |
| AT2G35530.1 | Thale cress | nucleus | 46.69 | 39.61 |
| CDY12261 | Canola | nucleus | 42.65 | 38.85 |
| CDY22589 | Canola | nucleus | 42.36 | 38.38 |
| Bra005335.1-P | Field mustard | nucleus | 46.4 | 38.15 |
| Bra023012.1-P | Field mustard | nucleus | 43.52 | 37.47 |
| CDY65764 | Canola | nucleus | 43.23 | 37.41 |
| Bra023243.1-P | Field mustard | nucleus | 37.75 | 37.22 |
| CDY40465 | Canola | nucleus | 31.41 | 36.33 |
| TraesCS4A01G073000.4 | Wheat | nucleus | 41.21 | 35.4 |
| CDX84198 | Canola | nucleus | 46.69 | 35.29 |
| CDX84103 | Canola | nucleus, plastid | 31.12 | 31.21 |
| CDY32123 | Canola | nucleus | 13.26 | 30.07 |
| Bra017316.1-P | Field mustard | nucleus | 21.04 | 27.65 |
| TraesCS5A01G460800.2 | Wheat | nucleus | 27.67 | 26.97 |
| TraesCS2A01G245700.2 | Wheat | nucleus | 28.53 | 26.19 |
| TraesCS1A01G409800.2 | Wheat | nucleus | 28.82 | 26.18 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR004827 |
| InterPro:MFMR | PFAM:PF00170 | PFAM:PF07777 | PFAM:PF16596 | ScanProsite:PS00036 | PFscan:PS50217 |
| PANTHER:PTHR22952 | PANTHER:PTHR22952:SF354 | SMART:SM00338 | SUPFAM:SSF57959 | EnsemblPlantsGene:TraesCS6A01G087400 | EnsemblPlants:TraesCS6A01G087400.2 |
| InterPro:bZIP | TIGR:cd14702 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr6A:-:55739695..55743604
Molecular Weight (calculated)
36626.1 Da
IEP (calculated)
6.442
GRAVY (calculated)
-0.992
Length
347 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSNDPSTPP KASKPPEQEQ PPATTSGTTA PVYPEWPGFQ GYPAMPPHGF FPPPVAAGQA HPYMWGAQHM VPPYGTPPPP YMMYPPGTVY AHPTTPGVHP
101: FHYPMQTNGN LEPAGAQGAA PGAAETNGKN EPGKTSGPSA NGVTSNSESG SDSESEGSDA NSQNDSHSKE NDVNENGSAQ NGVSHSSSHG TFNKPMPLVP
201: VQSGAVIGGV AGPATNLNIG MDYWGATGSS PVPAMRGKAP SGSARGEQWD ERELKKQKRK LSNRESARRS RLRKQAECEE LGQRAEALKS ENSSLRIELD
301: RIKKEYEELL SKNTSLKAKL GETGGGDSVP DMNERGDTNG GSHHKEP
101: FHYPMQTNGN LEPAGAQGAA PGAAETNGKN EPGKTSGPSA NGVTSNSESG SDSESEGSDA NSQNDSHSKE NDVNENGSAQ NGVSHSSSHG TFNKPMPLVP
201: VQSGAVIGGV AGPATNLNIG MDYWGATGSS PVPAMRGKAP SGSARGEQWD ERELKKQKRK LSNRESARRS RLRKQAECEE LGQRAEALKS ENSSLRIELD
301: RIKKEYEELL SKNTSLKAKL GETGGGDSVP DMNERGDTNG GSHHKEP
001: MGSSEMEKSG KEKEPKTTPP STSSSAPATV VSQEPSSAVS AGVAVTQDWS GFQAYSPMPP HGYVASSPQP HPYMWGVQHM MPPYGTPPHP YVTMYPPGGM
101: YAHPSLPPGS YPYSPYAMPS PNGMAEASGN TGSVIEGDGK PSDGKEKLPI KRSKGSLGSL NMIIGKNNEA GKNSGASANG ACSKSAESGS DGSSDGSDAN
201: SQNDSGSRHN GKDGETASES GGSAHGPPRN GSNLPVNQTV AIMPVSATGV PGPPTNLNIG MDYWSGHGNV SGAVPGVVVD GSQSQPWLQV SDEREIKRQR
301: RKQSNRESAR RSRLRKQAEC DELAQRAEVL NGENSSLRAE INKLKSQYEE LLAENSSLKN KFSSAPSLEG GDLDKNEQEP QRSTRQDVA
101: YAHPSLPPGS YPYSPYAMPS PNGMAEASGN TGSVIEGDGK PSDGKEKLPI KRSKGSLGSL NMIIGKNNEA GKNSGASANG ACSKSAESGS DGSSDGSDAN
201: SQNDSGSRHN GKDGETASES GGSAHGPPRN GSNLPVNQTV AIMPVSATGV PGPPTNLNIG MDYWSGHGNV SGAVPGVVVD GSQSQPWLQV SDEREIKRQR
301: RKQSNRESAR RSRLRKQAEC DELAQRAEVL NGENSSLRAE INKLKSQYEE LLAENSSLKN KFSSAPSLEG GDLDKNEQEP QRSTRQDVA
Arabidopsis Description
BZIP68bZIP transcription factor 68 [Source:UniProtKB/Swiss-Prot;Acc:Q84LG2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.