CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EES04440
EES18712
KXG23316
KXG33037

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G32150.1	EES04440	AT1G32150.1	18315949
AT1G32150.1	KXG23316	AT1G32150.1	18315949
AT1G32150.1	EES04440	AT2G35530.1	18315949
AT1G32150.1	KXG23316	AT2G35530.1	18315949
AT1G32150.1	EES18712	AT2G46270.1	18315949
AT1G32150.1	KXG33037	AT2G46270.1	18315949
AT1G32150.1	EES18712	AT4G01120.1	18315949
AT1G32150.1	KXG33037	AT4G01120.1	18315949
AT2G35530.1	EES04440	AT1G32150.1	18315949
AT2G35530.1	KXG23316	AT1G32150.1	18315949
AT2G35530.1	EES04440	AT2G35530.1	18315949
AT2G35530.1	KXG23316	AT2G35530.1	18315949
AT2G35530.1	EES18712	AT2G46270.1	18315949
AT2G35530.1	KXG33037	AT2G46270.1	18315949
AT2G35530.1	EES18712	AT4G01120.1	18315949
AT2G35530.1	KXG33037	AT4G01120.1	18315949

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d015118_P001	Maize	nucleus	74.57	90.0
Zm00001d053967_P001	Maize	nucleus	79.14	88.22
Zm00001d039206_P001	Maize	nucleus	50.86	85.58
Os02t0128200-01	Rice	nucleus	76.0	76.66
TraesCS6A01G087400.2	Wheat	nucleus	72.0	72.62
TraesCSU01G019200.1	Wheat	nucleus	71.43	72.46
HORVU6Hr1G016240.10	Barley	nucleus	72.0	71.39
TraesCS6B01G110100.1	Wheat	nucleus	70.57	70.77
KXG23316	Sorghum	nucleus	56.0	50.91
GSMUA_Achr4P11610_001	Banana	nucleus	41.71	48.99
GSMUA_Achr4P04530_001	Banana	nucleus	56.0	47.46
VIT_02s0012g02250.t01	Wine grape	nucleus	54.86	46.49
Solyc08g076100.2.1	Tomato	nucleus	54.29	46.45
Solyc08g005290.2.1	Tomato	nucleus	52.0	45.84
KRH39598	Soybean	nucleus	53.71	45.41
KRH74331	Soybean	nucleus	53.14	44.82
KRH07569	Soybean	nucleus	52.29	43.99
KRH45342	Soybean	nucleus	51.71	43.41
AT1G32150.1	Thale cress	nucleus	48.0	43.19
GSMUA_Achr6P01090_001	Banana	nucleus	50.86	43.1
GSMUA_AchrUn_...	Banana	nucleus	46.57	42.78
GSMUA_Achr4P18980_001	Banana	nucleus	48.57	42.18
PGSC0003DMT400047522	Potato	nucleus	46.0	41.82
GSMUA_Achr5P14150_001	Banana	nucleus	48.0	41.79
GSMUA_Achr4P27400_001	Banana	nucleus	48.29	41.12
CDY12261	Canola	nucleus	44.57	40.94
CDY31695	Canola	nucleus	46.0	40.76
CDY22589	Canola	nucleus	44.29	40.47
AT2G35530.1	Thale cress	nucleus	46.86	40.1
Bra023243.1-P	Field mustard	nucleus	40.0	39.77
OQU92933	Sorghum	nucleus	41.71	38.22
Bra005335.1-P	Field mustard	nucleus	46.0	38.15
CDY65764	Canola	nucleus	42.86	37.41
CDY40465	Canola	nucleus	31.71	37.0
Bra023012.1-P	Field mustard	nucleus	42.57	36.97
CDX84198	Canola	nucleus	46.29	35.29
CDX84103	Canola	nucleus, plastid	30.0	30.35
CDY32123	Canola	nucleus	13.14	30.07
Bra017316.1-P	Field mustard	nucleus	21.43	28.41
OQU90776	Sorghum	nucleus, plastid	23.71	27.3
EES18712	Sorghum	nucleus	28.29	25.92
KXG33037	Sorghum	nucleus	25.14	17.74
OQU88693	Sorghum	nucleus	32.29	17.12

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	EntrezGene:8055082	UniProt:C5XTR7	ncoils:Coil	EnsemblPlants:EES04440
ProteinID:EES04440	ProteinID:EES04440.1	GO:GO:0003674	GO:GO:0003700	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR004827	InterPro:MFMR
PFAM:PF00170	PFAM:PF07777	PFAM:PF16596	ScanProsite:PS00036	PFscan:PS50217	PANTHER:PTHR22952
PANTHER:PTHR22952:SF354	SMART:SM00338	EnsemblPlantsGene:SORBI_3004G026700	SUPFAM:SSF57959	UniParc:UPI0001A85313	RefSeq:XP_002451464.1
InterPro:bZIP	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:2138279..2142736

Molecular Weight (calculated)

37340.6 Da

IEP (calculated)

5.801

GRAVY (calculated)

-1.016

Length

350 amino acids

Sequence
(BLAST)

001: MGSNDPSTPS KASKASEQDQ PPATTSSGTP SVYPEWPSFQ AYSAIPPHGF FPPTVAANPQ AHPYMWGAQP MVPPYGTPPP PYVMYPPGTV YAHPSTPPTM
101: HPFSHYPMPT NGHAETPGAA PSAPEMNGKS EPGRTSAPSA NGITSHSESG SESESEGSDA NSQNDSHSKD NDGKEDGNSQ NGISYSASQG MLNQTMAMLP
201: VQPGAMVGGV PSSTANLNIG MDYWAASGSA AVPGTHGKAP VGSARGDQWD ERELKKQKRK QSNRESARRS RLRKQAECEE LGQRAEALRS ENSSLRAELE
301: RIRKEYEQLL SQNASLKEKL GATSDSIPDM NEKNDGDGSY KRQHDSDAQS

Best Arabidopsis Sequence Match ( AT1G32150.1 )
(BLAST)

001: MGSSEMEKSG KEKEPKTTPP STSSSAPATV VSQEPSSAVS AGVAVTQDWS GFQAYSPMPP HGYVASSPQP HPYMWGVQHM MPPYGTPPHP YVTMYPPGGM
101: YAHPSLPPGS YPYSPYAMPS PNGMAEASGN TGSVIEGDGK PSDGKEKLPI KRSKGSLGSL NMIIGKNNEA GKNSGASANG ACSKSAESGS DGSSDGSDAN
201: SQNDSGSRHN GKDGETASES GGSAHGPPRN GSNLPVNQTV AIMPVSATGV PGPPTNLNIG MDYWSGHGNV SGAVPGVVVD GSQSQPWLQV SDEREIKRQR
301: RKQSNRESAR RSRLRKQAEC DELAQRAEVL NGENSSLRAE INKLKSQYEE LLAENSSLKN KFSSAPSLEG GDLDKNEQEP QRSTRQDVA

Arabidopsis Description

BZIP68bZIP transcription factor 68 [Source:UniProtKB/Swiss-Prot;Acc:Q84LG2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.