Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G087400.2 | Wheat | nucleus | 98.26 | 97.69 |
| TraesCS6B01G110100.1 | Wheat | nucleus | 97.97 | 96.85 |
| HORVU6Hr1G016240.10 | Barley | nucleus | 97.97 | 95.75 |
| Os02t0128200-01 | Rice | nucleus | 75.36 | 74.93 |
| EES04440 | Sorghum | nucleus | 72.46 | 71.43 |
| Zm00001d053967_P001 | Maize | nucleus | 60.29 | 66.24 |
| Zm00001d015118_P001 | Maize | nucleus | 55.65 | 66.21 |
| Zm00001d039206_P001 | Maize | nucleus | 39.42 | 65.38 |
| GSMUA_Achr4P11610_001 | Banana | nucleus | 42.61 | 49.33 |
| VIT_02s0012g02250.t01 | Wine grape | nucleus | 56.23 | 46.97 |
| GSMUA_Achr4P04530_001 | Banana | nucleus | 54.78 | 45.76 |
| Solyc08g076100.2.1 | Tomato | nucleus | 53.91 | 45.48 |
| KRH07569 | Soybean | nucleus | 54.78 | 45.43 |
| Solyc08g005290.2.1 | Tomato | nucleus | 52.17 | 45.34 |
| KRH39598 | Soybean | nucleus | 54.2 | 45.17 |
| KRH74331 | Soybean | nucleus | 53.91 | 44.82 |
| GSMUA_Achr5P14150_001 | Banana | nucleus | 51.88 | 44.53 |
| KRH45342 | Soybean | nucleus | 52.75 | 43.65 |
| GSMUA_AchrUn_... | Banana | nucleus | 47.25 | 42.78 |
| PGSC0003DMT400047522 | Potato | nucleus | 46.38 | 41.56 |
| GSMUA_Achr6P01090_001 | Banana | nucleus | 49.57 | 41.4 |
| AT1G32150.1 | Thale cress | nucleus | 46.67 | 41.39 |
| GSMUA_Achr4P18980_001 | Banana | nucleus | 48.12 | 41.19 |
| GSMUA_Achr4P27400_001 | Banana | nucleus | 48.7 | 40.88 |
| CDY31695 | Canola | nucleus | 46.38 | 40.51 |
| AT2G35530.1 | Thale cress | nucleus | 47.25 | 39.85 |
| CDY12261 | Canola | nucleus | 42.9 | 38.85 |
| CDY22589 | Canola | nucleus | 42.61 | 38.38 |
| Bra005335.1-P | Field mustard | nucleus | 46.38 | 37.91 |
| Bra023012.1-P | Field mustard | nucleus | 44.06 | 37.72 |
| CDY65764 | Canola | nucleus | 43.77 | 37.66 |
| Bra023243.1-P | Field mustard | nucleus | 37.97 | 37.22 |
| CDY40465 | Canola | nucleus | 31.59 | 36.33 |
| CDX84198 | Canola | nucleus | 46.67 | 35.08 |
| CDX84103 | Canola | nucleus, plastid | 31.88 | 31.79 |
| CDY32123 | Canola | nucleus | 13.33 | 30.07 |
| Bra017316.1-P | Field mustard | nucleus | 21.16 | 27.65 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR004827 |
| InterPro:MFMR | PFAM:PF00170 | PFAM:PF07777 | PFAM:PF16596 | ScanProsite:PS00036 | PFscan:PS50217 |
| PANTHER:PTHR22952 | PANTHER:PTHR22952:SF354 | SMART:SM00338 | SUPFAM:SSF57959 | EnsemblPlantsGene:TraesCSU01G019200 | EnsemblPlants:TraesCSU01G019200.1 |
| InterPro:bZIP | TIGR:cd14702 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chrUn:+:20838631..20843468
Molecular Weight (calculated)
36403.8 Da
IEP (calculated)
6.355
GRAVY (calculated)
-0.992
Length
345 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSNDPSTPP KASKPPEQEQ PPATTSGTTA PVYPEWPGFQ GYPAMPPHGF FPPPVAAGQA HPYMWGAQHM VPPYGTPPPP YMMYPPGTVY AHPTTPGVHP
101: FHYPMQTNGN PEPAGAAPGA AETNGKNEPG KTSGPSANGV TSNSESGSDS ESEGSDANSQ NDSHSKENDV NENGSAQNGV SHSSSHGTFN KSMPLVPVQS
201: GAVIGGVAGP ATNLNIGMDY WGATGSSPVP AMRGKVPSGS ARGEQWDERE LKKQKRKLSN RESARRSRLR KQAECEELGQ RAEALKSENS SLRIELDRIK
301: KEYEELLSKN TSLKAKLGET GGGGDAVPDM NERGDTNGGS HQKEP
101: FHYPMQTNGN PEPAGAAPGA AETNGKNEPG KTSGPSANGV TSNSESGSDS ESEGSDANSQ NDSHSKENDV NENGSAQNGV SHSSSHGTFN KSMPLVPVQS
201: GAVIGGVAGP ATNLNIGMDY WGATGSSPVP AMRGKVPSGS ARGEQWDERE LKKQKRKLSN RESARRSRLR KQAECEELGQ RAEALKSENS SLRIELDRIK
301: KEYEELLSKN TSLKAKLGET GGGGDAVPDM NERGDTNGGS HQKEP
001: MGSSEMEKSG KEKEPKTTPP STSSSAPATV VSQEPSSAVS AGVAVTQDWS GFQAYSPMPP HGYVASSPQP HPYMWGVQHM MPPYGTPPHP YVTMYPPGGM
101: YAHPSLPPGS YPYSPYAMPS PNGMAEASGN TGSVIEGDGK PSDGKEKLPI KRSKGSLGSL NMIIGKNNEA GKNSGASANG ACSKSAESGS DGSSDGSDAN
201: SQNDSGSRHN GKDGETASES GGSAHGPPRN GSNLPVNQTV AIMPVSATGV PGPPTNLNIG MDYWSGHGNV SGAVPGVVVD GSQSQPWLQV SDEREIKRQR
301: RKQSNRESAR RSRLRKQAEC DELAQRAEVL NGENSSLRAE INKLKSQYEE LLAENSSLKN KFSSAPSLEG GDLDKNEQEP QRSTRQDVA
101: YAHPSLPPGS YPYSPYAMPS PNGMAEASGN TGSVIEGDGK PSDGKEKLPI KRSKGSLGSL NMIIGKNNEA GKNSGASANG ACSKSAESGS DGSSDGSDAN
201: SQNDSGSRHN GKDGETASES GGSAHGPPRN GSNLPVNQTV AIMPVSATGV PGPPTNLNIG MDYWSGHGNV SGAVPGVVVD GSQSQPWLQV SDEREIKRQR
301: RKQSNRESAR RSRLRKQAEC DELAQRAEVL NGENSSLRAE INKLKSQYEE LLAENSSLKN KFSSAPSLEG GDLDKNEQEP QRSTRQDVA
Arabidopsis Description
BZIP68bZIP transcription factor 68 [Source:UniProtKB/Swiss-Prot;Acc:Q84LG2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.