Factsheet for HORVU6Hr1G016240.10

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G089970.10
HORVU1Hr1G090030.11
HORVU5Hr1G029130.19
HORVU6Hr1G016240.10

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G32150.1	HORVU5Hr1G029130.19	AT1G32150.1	18315949
AT1G32150.1	HORVU6Hr1G016240.10	AT1G32150.1	18315949
AT1G32150.1	HORVU5Hr1G029130.19	AT2G35530.1	18315949
AT1G32150.1	HORVU6Hr1G016240.10	AT2G35530.1	18315949
AT1G32150.1	HORVU1Hr1G089970.10	AT2G46270.1	18315949
AT1G32150.1	HORVU1Hr1G090030.11	AT2G46270.1	18315949
AT1G32150.1	HORVU1Hr1G089970.10	AT4G01120.1	18315949
AT1G32150.1	HORVU1Hr1G090030.11	AT4G01120.1	18315949
AT2G35530.1	HORVU5Hr1G029130.19	AT1G32150.1	18315949
AT2G35530.1	HORVU6Hr1G016240.10	AT1G32150.1	18315949
AT2G35530.1	HORVU5Hr1G029130.19	AT2G35530.1	18315949
AT2G35530.1	HORVU6Hr1G016240.10	AT2G35530.1	18315949
AT2G35530.1	HORVU1Hr1G089970.10	AT2G46270.1	18315949
AT2G35530.1	HORVU1Hr1G090030.11	AT2G46270.1	18315949
AT2G35530.1	HORVU1Hr1G089970.10	AT4G01120.1	18315949
AT2G35530.1	HORVU1Hr1G090030.11	AT4G01120.1	18315949

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G087400.2	Wheat	nucleus	97.45	99.14
TraesCSU01G019200.1	Wheat	nucleus	95.75	97.97
TraesCS6B01G110100.1	Wheat	nucleus	95.75	96.85
Os02t0128200-01	Rice	nucleus	74.22	75.5
EES04440	Sorghum	nucleus	71.39	72.0
Zm00001d053967_P001	Maize	nucleus	59.49	66.88
Zm00001d015118_P001	Maize	nucleus	54.67	66.55
Zm00001d039206_P001	Maize	nucleus	38.53	65.38
GSMUA_Achr4P11610_001	Banana	nucleus	41.36	48.99
VIT_02s0012g02250.t01	Wine grape	nucleus	54.11	46.25
GSMUA_Achr4P04530_001	Banana	nucleus	53.54	45.76
Solyc08g076100.2.1	Tomato	nucleus	52.97	45.72
Solyc08g005290.2.1	Tomato	nucleus	50.71	45.09
KRH07569	Soybean	nucleus	52.97	44.95
KRH39598	Soybean	nucleus	52.69	44.93
KRH74331	Soybean	nucleus	52.69	44.82
GSMUA_Achr5P14150_001	Banana	nucleus	50.42	44.28
KRH45342	Soybean	nucleus	50.99	43.17
GSMUA_AchrUn_...	Banana	nucleus	46.46	43.04
GSMUA_Achr6P01090_001	Banana	nucleus	48.44	41.4
AT1G32150.1	Thale cress	nucleus	45.61	41.39
PGSC0003DMT400047522	Potato	nucleus	45.04	41.3
GSMUA_Achr4P18980_001	Banana	nucleus	46.74	40.94
GSMUA_Achr4P27400_001	Banana	nucleus	47.59	40.88
HORVU5Hr1G029130.19	Barley	nucleus	44.48	40.36
CDY31695	Canola	nucleus	45.04	40.25
AT2G35530.1	Thale cress	nucleus	45.89	39.61
CDY12261	Canola	nucleus	41.93	38.85
CDY22589	Canola	nucleus	41.64	38.38
Bra005335.1-P	Field mustard	nucleus	45.04	37.68
Bra023012.1-P	Field mustard	nucleus	42.78	37.47
CDY65764	Canola	nucleus	42.49	37.41
Bra023243.1-P	Field mustard	nucleus	37.11	37.22
CDY40465	Canola	nucleus	30.88	36.33
HORVU4Hr1G064120.18	Barley	nucleus	40.23	35.15
CDX84198	Canola	nucleus	45.33	34.86
HORVU2Hr1G055230.2	Barley	nucleus	12.46	31.88
CDX84103	Canola	nucleus, plastid	30.88	31.5
CDY32123	Canola	nucleus	13.03	30.07
Bra017316.1-P	Field mustard	nucleus	20.68	27.65
HORVU0Hr1G013950.21	Barley	nucleus	24.65	24.79
HORVU1Hr1G090030.11	Barley	nucleus, plastid	28.05	21.66
HORVU2Hr1G055160.2	Barley	extracellular, mitochondrion, plastid, vacuole	18.41	19.82
HORVU1Hr1G089970.10	Barley	cytosol	16.43	15.68

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	UniProt:A0A287TEZ2	ncoils:Coil	GO:GO:0003674	GO:GO:0003700
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
EnsemblPlantsGene:HORVU6Hr1G016240	EnsemblPlants:HORVU6Hr1G016240.10	InterPro:IPR004827	InterPro:MFMR	PFAM:PF00170	PFAM:PF07777
PFAM:PF16596	ScanProsite:PS00036	PFscan:PS50217	PANTHER:PTHR22952	PANTHER:PTHR22952:SF354	SMART:SM00338
SUPFAM:SSF57959	UniParc:UPI000B465ADD	InterPro:bZIP	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr6H:-:36195558..36200663

Molecular Weight (calculated)

37413.9 Da

IEP (calculated)

6.378

GRAVY (calculated)

-1.018

Length

353 amino acids

Sequence
(BLAST)

001: MGSNDPSTPP KASKPPEQQE QPPATTSGTT APVYPEWPGF QGYPAMPPHG FFPPPVAAGQ AHPYMWGAQQ HMVPPYGTPP PPYMMYPPGT VYAHPTTPGV
101: HPFHYPMQTN GNLEPAGAQG AAPGAAETNG KNEPGKTSGP SANGVTSNSE SGSDSESEGS DANSQNDSHS KENDVNENGS AQNGVSHSSS HGTFNKPMPL
201: VPVQSGAVIG GVAGPATNLN IGMDYWGATG SSPVPAIRGK VPSGSARGEQ WDERELKKQK RKLSNRESAR RSRLRKQAEC EELGQRAEAL KSENSSLRIE
301: LDRIKKEYEE LLSKNTSLKA KLGETGGGDS VPDMNERGDT NGGSHHHQQQ QEP

Best Arabidopsis Sequence Match ( AT1G32150.1 )
(BLAST)

001: MGSSEMEKSG KEKEPKTTPP STSSSAPATV VSQEPSSAVS AGVAVTQDWS GFQAYSPMPP HGYVASSPQP HPYMWGVQHM MPPYGTPPHP YVTMYPPGGM
101: YAHPSLPPGS YPYSPYAMPS PNGMAEASGN TGSVIEGDGK PSDGKEKLPI KRSKGSLGSL NMIIGKNNEA GKNSGASANG ACSKSAESGS DGSSDGSDAN
201: SQNDSGSRHN GKDGETASES GGSAHGPPRN GSNLPVNQTV AIMPVSATGV PGPPTNLNIG MDYWSGHGNV SGAVPGVVVD GSQSQPWLQV SDEREIKRQR
301: RKQSNRESAR RSRLRKQAEC DELAQRAEVL NGENSSLRAE INKLKSQYEE LLAENSSLKN KFSSAPSLEG GDLDKNEQEP QRSTRQDVA

Arabidopsis Description

BZIP68bZIP transcription factor 68 [Source:UniProtKB/Swiss-Prot;Acc:Q84LG2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.