Factsheet for HORVU4Hr1G064120.18

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
plastid 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G230200.3	Wheat	nucleus	97.03	97.03
TraesCS4B01G229100.2	Wheat	nucleus	96.53	96.53
TraesCS4A01G073000.4	Wheat	nucleus	95.54	95.54
OQU92933	Sorghum	nucleus	80.2	84.82
Os03t0239400-01	Rice	nucleus	79.21	83.55
Zm00001d047967_P003	Maize	nucleus	68.81	65.72
Zm00001d028372_P005	Maize	nucleus	76.98	51.32
HORVU6Hr1G016240.10	Barley	nucleus	35.15	40.23
HORVU5Hr1G029130.19	Barley	nucleus	33.42	34.7
HORVU2Hr1G055230.2	Barley	nucleus	9.9	28.99
HORVU1Hr1G090030.11	Barley	nucleus, plastid	27.23	24.07
HORVU0Hr1G013950.21	Barley	nucleus	19.31	22.22
HORVU2Hr1G055160.2	Barley	extracellular, mitochondrion, plastid, vacuole	15.35	18.9
HORVU1Hr1G089970.10	Barley	cytosol	16.34	17.84

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003700	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:HORVU4Hr1G064120
EnsemblPlants:HORVU4Hr1G064120.18	InterPro:IPR004827	UniProt:M0XBA5	InterPro:MFMR	PFAM:PF00170	PFAM:PF07777
PFAM:PF16596	ScanProsite:PS00036	PFscan:PS50217	PANTHER:PTHR22952	PANTHER:PTHR22952:SF142	SMART:SM00338
SUPFAM:SSF57959	UniParc:UPI0002951A65	InterPro:bZIP	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr4H:+:537523657..537528265

Molecular Weight (calculated)

43429.6 Da

IEP (calculated)

9.387

GRAVY (calculated)

-0.863

Length

404 amino acids

Sequence
(BLAST)

001: MGKGDVATRS KSQKSSTVQV CVNKLNCVSK YCHCLTLFYL FQNEQSTPTN PPTAYPDWSQ FQAYYNVPGT AQMTPPAYFH STVAPSPQGH PYMWGPQMMP
101: PYGTPPPYAT MYAQGTPYQQ APMPPGSHPY SPYPVQAPNG TVQTPTSGAG GSETDKSNKN KRKTPLKRSK GSLGSLDVVT VKDKTPPPKS LVSSSNEGSS
201: QSESGSGSYS GGSSTNSKSG SQTKDGSEHG PANDASNKGV TAQGTAVEPT QVSSGPVVLN PMMPYWPVPP PMPGQATGVN MGMDYWGAPT SVPMHGKAVA
301: APTSAPSSNS RDIVLSDPVI QDEREVKKQK RKQSNRESAR RSRLRKQAEW EEVASRADLL KQENSSLKEE LKQLQEKCDS LTSENTSLHE KLKAVDSEKP
401: NGNL

Best Arabidopsis Sequence Match ( AT1G32150.1 )
(BLAST)

001: MGSSEMEKSG KEKEPKTTPP STSSSAPATV VSQEPSSAVS AGVAVTQDWS GFQAYSPMPP HGYVASSPQP HPYMWGVQHM MPPYGTPPHP YVTMYPPGGM
101: YAHPSLPPGS YPYSPYAMPS PNGMAEASGN TGSVIEGDGK PSDGKEKLPI KRSKGSLGSL NMIIGKNNEA GKNSGASANG ACSKSAESGS DGSSDGSDAN
201: SQNDSGSRHN GKDGETASES GGSAHGPPRN GSNLPVNQTV AIMPVSATGV PGPPTNLNIG MDYWSGHGNV SGAVPGVVVD GSQSQPWLQV SDEREIKRQR
301: RKQSNRESAR RSRLRKQAEC DELAQRAEVL NGENSSLRAE INKLKSQYEE LLAENSSLKN KFSSAPSLEG GDLDKNEQEP QRSTRQDVA

Arabidopsis Description

BZIP68bZIP transcription factor 68 [Source:UniProtKB/Swiss-Prot;Acc:Q84LG2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.