Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 2
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU5Hr1G029130.19 | |
| HORVU6Hr1G016240.10 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G409800.2 | Wheat | nucleus | 78.56 | 93.98 |
| TraesCS1D01G417100.1 | Wheat | nucleus | 79.65 | 90.55 |
| TraesCS1B01G439800.1 | Wheat | nucleus | 79.65 | 90.32 |
| Os05t0569300-01 | Rice | nucleus | 61.71 | 74.21 |
| EES18712 | Sorghum | nucleus | 59.08 | 70.68 |
| Zm00001d039065_P006 | Maize | nucleus | 58.21 | 70.56 |
| Zm00001d040500_P001 | Maize | nucleus | 28.88 | 68.04 |
| Zm00001d043908_P001 | Maize | nucleus | 27.79 | 66.49 |
| Zm00001d025638_P001 | Maize | nucleus | 27.79 | 66.49 |
| HORVU1Hr1G089970.10 | Barley | cytosol | 53.39 | 65.95 |
| GSMUA_Achr6P32000_001 | Banana | nucleus | 35.01 | 42.44 |
| KRH68860 | Soybean | nucleus | 37.42 | 40.24 |
| KRG97109 | Soybean | nucleus | 37.2 | 40.0 |
| GSMUA_Achr9P05310_001 | Banana | nucleus | 36.1 | 39.66 |
| VIT_15s0046g01440.t01 | Wine grape | nucleus | 37.2 | 39.53 |
| KRH06537 | Soybean | nucleus | 36.1 | 38.92 |
| KRH47979 | Soybean | nucleus | 35.89 | 38.68 |
| GSMUA_Achr1P05050_001 | Banana | nucleus | 35.67 | 38.26 |
| CDY07176 | Canola | nucleus | 29.76 | 37.47 |
| Solyc01g095460.2.1 | Tomato | nucleus | 34.14 | 37.32 |
| AT2G46270.1 | Thale cress | nucleus | 31.07 | 37.17 |
| Bra037382.1-P | Field mustard | nucleus | 29.54 | 36.78 |
| PGSC0003DMT400000266 | Potato | nucleus | 33.48 | 36.69 |
| Bra004550.1-P | Field mustard | nucleus | 30.42 | 36.68 |
| AT4G01120.1 | Thale cress | nucleus | 28.88 | 36.67 |
| CDY48506 | Canola | nucleus | 29.1 | 36.44 |
| CDX95685 | Canola | nucleus | 23.85 | 36.33 |
| PGSC0003DMT400084203 | Potato | nucleus | 31.95 | 35.35 |
| CDY42029 | Canola | nucleus | 31.07 | 34.3 |
| Solyc05g050220.2.1 | Tomato | nucleus | 31.07 | 34.13 |
| HORVU2Hr1G055230.2 | Barley | nucleus | 10.28 | 34.06 |
| VIT_02s0025g01020.t01 | Wine grape | nucleus | 28.45 | 32.66 |
| CDX80004 | Canola | golgi | 31.51 | 32.51 |
| HORVU6Hr1G016240.10 | Barley | nucleus | 21.66 | 28.05 |
| HORVU4Hr1G064120.18 | Barley | nucleus | 24.07 | 27.23 |
| HORVU5Hr1G029130.19 | Barley | nucleus | 20.35 | 23.91 |
| HORVU0Hr1G013950.21 | Barley | nucleus | 16.63 | 21.65 |
| HORVU2Hr1G055160.2 | Barley | extracellular, mitochondrion, plastid, vacuole | 12.91 | 17.99 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | UniProt:A0A287GNG4 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003700 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| EnsemblPlantsGene:HORVU1Hr1G090030 | EnsemblPlants:HORVU1Hr1G090030.11 | InterPro:IPR004827 | InterPro:MFMR | PFAM:PF00170 | PFAM:PF07777 |
| ScanProsite:PS00036 | PFscan:PS50217 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF230 | SMART:SM00338 | SUPFAM:SSF57959 |
| UniParc:UPI000B46BC3E | InterPro:bZIP | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chrchr1H:-:545143042..545148001
Molecular Weight (calculated)
48172.7 Da
IEP (calculated)
9.928
GRAVY (calculated)
-0.649
Length
457 amino acids
Sequence
(BLAST)
(BLAST)
001: SPQLSFPLPS PPPLLSSPLL SAPPPPSPSP SHRAPPPSPE LNHRAGPPDP RQPAPPPGAR RTVPSRTRQV FSEGMAHDEA VSAQKTGKSG SPPKDQPAPC
101: PYPDWSAMQA YYGSGVMPPA YFAPAIAAGH PPPPYMWGPQ HMMPPPFGTP YAMYSHGGAY PHPLVPMMAN PLSVEPAKSA NSKDKSSNKK LKEIDGSAVS
201: TGSGNSKKTT SSGDYSGEGS SDVNDLKVSG TPRKRSLDGG FDTEATAAAR NKDVVASNPT IRNGTILPNQ CFPAPVIKPS VTNVANSRAI GTPVSPLPGV
301: MAPIHTGIST ELSSKDEREV KREKRKQSNR ESARRSRLRK QAETEELATQ VESLTAENTS LKSEIGKLAK SSEKLRLENS ALVVKLKGAA APADAEMPLD
401: KSAAAAAPSS SPRIVENFLS MIDDTNKSGV NNHMEHSEPK LRQLLGSSTT TDVVAAS
101: PYPDWSAMQA YYGSGVMPPA YFAPAIAAGH PPPPYMWGPQ HMMPPPFGTP YAMYSHGGAY PHPLVPMMAN PLSVEPAKSA NSKDKSSNKK LKEIDGSAVS
201: TGSGNSKKTT SSGDYSGEGS SDVNDLKVSG TPRKRSLDGG FDTEATAAAR NKDVVASNPT IRNGTILPNQ CFPAPVIKPS VTNVANSRAI GTPVSPLPGV
301: MAPIHTGIST ELSSKDEREV KREKRKQSNR ESARRSRLRK QAETEELATQ VESLTAENTS LKSEIGKLAK SSEKLRLENS ALVVKLKGAA APADAEMPLD
401: KSAAAAAPSS SPRIVENFLS MIDDTNKSGV NNHMEHSEPK LRQLLGSSTT TDVVAAS
001: MGNSSEEPKP PTKSDKPSSP PVDQTNVHVY PDWAAMQAYY GPRVAMPPYY NSAMAASGHP PPPYMWNPQH MMSPYGAPYA AVYPHGGGVY AHPGIPMGSL
101: PQGQKDPPLT TPGTLLSIDT PTKSTGNTDN GLMKKLKEFD GLAMSLGNGN PENGADEHKR SRNSSETDGS TDGSDGNTTG ADEPKLKRSR EGTPTKDGKQ
201: LVQASSFHSV SPSSGDTGVK LIQGSGAILS PGVSANSNPF MSQSLAMVPP ETWLQNEREL KRERRKQSNR ESARRSRLRK QAETEELARK VEALTAENMA
301: LRSELNQLNE KSDKLRGANA TLLDKLKCSE PEKRVPANML SRVKNSGAGD KNKNQGDNDS NSTSKLHQLL DTKPRAKAVA AG
101: PQGQKDPPLT TPGTLLSIDT PTKSTGNTDN GLMKKLKEFD GLAMSLGNGN PENGADEHKR SRNSSETDGS TDGSDGNTTG ADEPKLKRSR EGTPTKDGKQ
201: LVQASSFHSV SPSSGDTGVK LIQGSGAILS PGVSANSNPF MSQSLAMVPP ETWLQNEREL KRERRKQSNR ESARRSRLRK QAETEELARK VEALTAENMA
301: LRSELNQLNE KSDKLRGANA TLLDKLKCSE PEKRVPANML SRVKNSGAGD KNKNQGDNDS NSTSKLHQLL DTKPRAKAVA AG
Arabidopsis Description
GBF3G-box-binding factor 3 [Source:UniProtKB/Swiss-Prot;Acc:P42776]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.