Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d039065_P006 | Maize | nucleus | 87.96 | 89.12 |
| Zm00001d040500_P001 | Maize | nucleus | 41.1 | 80.93 |
| Zm00001d043908_P001 | Maize | nucleus | 39.79 | 79.58 |
| Zm00001d025638_P001 | Maize | nucleus | 39.79 | 79.58 |
| Os05t0569300-01 | Rice | nucleus | 74.61 | 75.0 |
| TraesCS1A01G409800.2 | Wheat | nucleus | 71.47 | 71.47 |
| TraesCS1D01G417100.1 | Wheat | nucleus | 70.94 | 67.41 |
| TraesCS1B01G439800.1 | Wheat | nucleus | 70.16 | 66.5 |
| HORVU1Hr1G090030.11 | Barley | nucleus, plastid | 70.68 | 59.08 |
| HORVU1Hr1G089970.10 | Barley | cytosol | 46.86 | 48.38 |
| GSMUA_Achr6P32000_001 | Banana | nucleus | 40.58 | 41.11 |
| GSMUA_Achr9P05310_001 | Banana | nucleus | 42.41 | 38.94 |
| KRH68860 | Soybean | nucleus | 43.19 | 38.82 |
| KXG33037 | Sorghum | nucleus | 50.26 | 38.71 |
| KRG97109 | Soybean | nucleus | 42.93 | 38.59 |
| VIT_15s0046g01440.t01 | Wine grape | nucleus | 42.41 | 37.67 |
| GSMUA_Achr1P05050_001 | Banana | nucleus | 41.36 | 37.09 |
| KRH06537 | Soybean | nucleus | 41.1 | 37.03 |
| Bra004550.1-P | Field mustard | nucleus | 36.13 | 36.41 |
| CDX95685 | Canola | nucleus | 28.53 | 36.33 |
| KRH47979 | Soybean | nucleus | 40.31 | 36.32 |
| AT2G46270.1 | Thale cress | nucleus | 35.34 | 35.34 |
| Solyc01g095460.2.1 | Tomato | nucleus | 38.48 | 35.17 |
| AT4G01120.1 | Thale cress | nucleus | 32.72 | 34.72 |
| PGSC0003DMT400000266 | Potato | nucleus | 37.7 | 34.53 |
| PGSC0003DMT400084203 | Potato | nucleus | 36.65 | 33.9 |
| CDY07176 | Canola | nucleus | 32.2 | 33.88 |
| Bra037382.1-P | Field mustard | nucleus | 32.2 | 33.52 |
| CDY42029 | Canola | nucleus | 36.13 | 33.33 |
| CDY48506 | Canola | nucleus | 31.41 | 32.88 |
| Solyc05g050220.2.1 | Tomato | nucleus | 35.6 | 32.69 |
| CDX80004 | Canola | golgi | 36.13 | 31.15 |
| OQU92933 | Sorghum | nucleus | 30.1 | 30.1 |
| VIT_02s0025g01020.t01 | Wine grape | nucleus | 31.15 | 29.9 |
| KXG23316 | Sorghum | nucleus | 29.06 | 28.83 |
| EES04440 | Sorghum | nucleus | 25.92 | 28.29 |
| OQU90776 | Sorghum | nucleus, plastid | 18.59 | 23.36 |
| OQU88693 | Sorghum | nucleus | 24.35 | 14.09 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | EntrezGene:8064695 | UniProt:C5YVZ3 | ncoils:Coil | EnsemblPlants:EES18712 |
| ProteinID:EES18712 | ProteinID:EES18712.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | InterPro:IPR004827 | InterPro:MFMR | PFAM:PF00170 | PFAM:PF07777 | ScanProsite:PS00036 |
| PFscan:PS50217 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF230 | SMART:SM00338 | EnsemblPlantsGene:SORBI_3009G237600 | SUPFAM:SSF57959 |
| unigene:Sbi.10607 | UniParc:UPI0001A8871A | RefSeq:XP_002440282.1 | InterPro:bZIP | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr9:+:57581046..57585953
Molecular Weight (calculated)
40594.4 Da
IEP (calculated)
7.773
GRAVY (calculated)
-0.654
Length
382 amino acids
Sequence
(BLAST)
(BLAST)
001: MAQDEAVATQ KTGNTASPSK DYPTPSPYPD WSTMQAYYGP GVLPPTYFAP AIAPGHPPPY MWGPQPIMPP PFGTPYAAVY PHGGAYPHPL VPMMSTPLSM
101: EPAKSANSKE KNSNKKLKEI DRTAVSAGSG NSKRTMSSSE DYSAEGSSDV NDQKVNKTSR KQNSDDGPGA ETTTGANTEC VLAPNHTMGN GAILPHHCFP
201: APVIKPSATN VANSRVIGTA ISPSPSVMVP AHTALPADLS VKDERELKRE KRKQSNRESA RRSRLRKQAE TEELATQVES LTTENTSLRS EIGRLTESSE
301: KLRLENSALM VKLKDTAALT PAEPSPHTAV TSSSSPGAAA ENFLSMIDSA KAAGVSRHTE HGEPKLRQLL DSSPATDVAA VS
101: EPAKSANSKE KNSNKKLKEI DRTAVSAGSG NSKRTMSSSE DYSAEGSSDV NDQKVNKTSR KQNSDDGPGA ETTTGANTEC VLAPNHTMGN GAILPHHCFP
201: APVIKPSATN VANSRVIGTA ISPSPSVMVP AHTALPADLS VKDERELKRE KRKQSNRESA RRSRLRKQAE TEELATQVES LTTENTSLRS EIGRLTESSE
301: KLRLENSALM VKLKDTAALT PAEPSPHTAV TSSSSPGAAA ENFLSMIDSA KAAGVSRHTE HGEPKLRQLL DSSPATDVAA VS
001: MGNSSEEPKP PTKSDKPSSP PVDQTNVHVY PDWAAMQAYY GPRVAMPPYY NSAMAASGHP PPPYMWNPQH MMSPYGAPYA AVYPHGGGVY AHPGIPMGSL
101: PQGQKDPPLT TPGTLLSIDT PTKSTGNTDN GLMKKLKEFD GLAMSLGNGN PENGADEHKR SRNSSETDGS TDGSDGNTTG ADEPKLKRSR EGTPTKDGKQ
201: LVQASSFHSV SPSSGDTGVK LIQGSGAILS PGVSANSNPF MSQSLAMVPP ETWLQNEREL KRERRKQSNR ESARRSRLRK QAETEELARK VEALTAENMA
301: LRSELNQLNE KSDKLRGANA TLLDKLKCSE PEKRVPANML SRVKNSGAGD KNKNQGDNDS NSTSKLHQLL DTKPRAKAVA AG
101: PQGQKDPPLT TPGTLLSIDT PTKSTGNTDN GLMKKLKEFD GLAMSLGNGN PENGADEHKR SRNSSETDGS TDGSDGNTTG ADEPKLKRSR EGTPTKDGKQ
201: LVQASSFHSV SPSSGDTGVK LIQGSGAILS PGVSANSNPF MSQSLAMVPP ETWLQNEREL KRERRKQSNR ESARRSRLRK QAETEELARK VEALTAENMA
301: LRSELNQLNE KSDKLRGANA TLLDKLKCSE PEKRVPANML SRVKNSGAGD KNKNQGDNDS NSTSKLHQLL DTKPRAKAVA AG
Arabidopsis Description
GBF3G-box-binding factor 3 [Source:UniProtKB/Swiss-Prot;Acc:P42776]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.