Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
19321431
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os02t0128200-01 | |
| Os12t0233800-02 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES18712 | Sorghum | nucleus | 75.0 | 74.61 |
| TraesCS1A01G409800.2 | Wheat | nucleus | 74.47 | 74.08 |
| Zm00001d039065_P006 | Maize | nucleus | 72.37 | 72.94 |
| TraesCS1D01G417100.1 | Wheat | nucleus | 73.68 | 69.65 |
| TraesCS1B01G439800.1 | Wheat | nucleus | 73.68 | 69.48 |
| Zm00001d040500_P001 | Maize | nucleus | 35.26 | 69.07 |
| Zm00001d043908_P001 | Maize | nucleus | 33.95 | 67.54 |
| Zm00001d025638_P001 | Maize | nucleus | 33.95 | 67.54 |
| HORVU1Hr1G090030.11 | Barley | nucleus, plastid | 74.21 | 61.71 |
| Os01t0658900-01 | Rice | nucleus | 56.84 | 60.0 |
| HORVU1Hr1G089970.10 | Barley | cytosol | 47.63 | 48.92 |
| GSMUA_Achr6P32000_001 | Banana | nucleus | 42.37 | 42.71 |
| GSMUA_Achr1P05050_001 | Banana | nucleus | 43.95 | 39.2 |
| GSMUA_Achr9P05310_001 | Banana | nucleus | 42.63 | 38.94 |
| VIT_15s0046g01440.t01 | Wine grape | nucleus | 43.95 | 38.84 |
| KRG97109 | Soybean | nucleus | 43.42 | 38.82 |
| KRH68860 | Soybean | nucleus | 43.42 | 38.82 |
| CDX95685 | Canola | nucleus | 30.26 | 38.33 |
| Bra004550.1-P | Field mustard | nucleus | 37.37 | 37.47 |
| AT2G46270.1 | Thale cress | nucleus | 37.63 | 37.43 |
| KRH06537 | Soybean | nucleus | 41.32 | 37.03 |
| KRH47979 | Soybean | nucleus | 41.32 | 37.03 |
| Solyc01g095460.2.1 | Tomato | nucleus | 40.26 | 36.6 |
| AT4G01120.1 | Thale cress | nucleus | 34.21 | 36.11 |
| PGSC0003DMT400000266 | Potato | nucleus | 39.47 | 35.97 |
| PGSC0003DMT400084203 | Potato | nucleus | 38.68 | 35.59 |
| CDY07176 | Canola | nucleus | 33.68 | 35.26 |
| Bra037382.1-P | Field mustard | nucleus | 33.68 | 34.88 |
| CDY48506 | Canola | nucleus | 33.16 | 34.52 |
| CDY42029 | Canola | nucleus | 37.37 | 34.3 |
| Solyc05g050220.2.1 | Tomato | nucleus | 36.58 | 33.41 |
| CDX80004 | Canola | golgi | 37.37 | 32.05 |
| Os03t0239400-01 | Rice | nucleus | 30.79 | 30.55 |
| VIT_02s0025g01020.t01 | Wine grape | nucleus | 31.84 | 30.4 |
| Os02t0128200-01 | Rice | nucleus | 26.32 | 28.82 |
| Os07t0209800-01 | Rice | nucleus | 26.32 | 25.77 |
| Os03t0809200-01 | Rice | cytosol, nucleus | 6.58 | 25.51 |
| Os12t0233800-02 | Rice | nucleus | 18.68 | 22.83 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | EntrezGene:4339653 | ProteinID:AAT93931.1 | ProteinID:AAU10677.1 | ProteinID:BAF18276.1 |
| ProteinID:BAS95406.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006355 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR004827 | InterPro:MFMR |
| EnsemblPlantsGene:Os05g0569300 | EnsemblPlants:Os05t0569300-01 | PFAM:PF00170 | PFAM:PF07777 | ScanProsite:PS00036 | PFscan:PS50217 |
| PANTHER:PTHR22952 | PANTHER:PTHR22952:SF230 | UniProt:Q6AUN3 | SMART:SM00338 | SUPFAM:SSF57959 | UniParc:UPI000040363B |
| RefSeq:XP_015640745.1 | InterPro:bZIP | SEG:seg | : | : | : |
Description
b-ZIP TRANSCRIPTION FACTOR 45Similar to G-box binding factor 1. (Os05t0569300-01)
Coordinates
chr5:+:28334780..28339606
Molecular Weight (calculated)
40410.7 Da
IEP (calculated)
9.690
GRAVY (calculated)
-0.615
Length
380 amino acids
Sequence
(BLAST)
(BLAST)
001: MAHDEAVATQ KIGKTTSPPK DQPTPCPFPD WSAVQAYYGP GVLPPTYFAP AIASGHAPPP YMWGPQPIMP PPFGTPYAAM YPHGGAYPHP LMPMMANPLS
101: MEPAKSASSK EKGSNKKLKE VDGAAVSTGS GDSKKTMTSS GDYSAEGSSD VNDLKVGKTG RKRRLDDGAG AETSAAAKME NALPPSHILG STAILPNHSF
201: PAQVIRPSAT NVANSRALGT PISPPPGVIV PSHTGVSTEL LIKDERELKR EKRKQSNRES ARRSRLRKQA ETEDLATQVE SLTAENTSLR SEISRLSESS
301: EKLRLENSAL MGKLKDPAAS TQAETSLQKT TTASSPRVVE NFLSMIDNTN KTSVRHTEHA EPKLRQLLGS GPATDVVAAS
101: MEPAKSASSK EKGSNKKLKE VDGAAVSTGS GDSKKTMTSS GDYSAEGSSD VNDLKVGKTG RKRRLDDGAG AETSAAAKME NALPPSHILG STAILPNHSF
201: PAQVIRPSAT NVANSRALGT PISPPPGVIV PSHTGVSTEL LIKDERELKR EKRKQSNRES ARRSRLRKQA ETEDLATQVE SLTAENTSLR SEISRLSESS
301: EKLRLENSAL MGKLKDPAAS TQAETSLQKT TTASSPRVVE NFLSMIDNTN KTSVRHTEHA EPKLRQLLGS GPATDVVAAS
001: MGNSSEEPKP PTKSDKPSSP PVDQTNVHVY PDWAAMQAYY GPRVAMPPYY NSAMAASGHP PPPYMWNPQH MMSPYGAPYA AVYPHGGGVY AHPGIPMGSL
101: PQGQKDPPLT TPGTLLSIDT PTKSTGNTDN GLMKKLKEFD GLAMSLGNGN PENGADEHKR SRNSSETDGS TDGSDGNTTG ADEPKLKRSR EGTPTKDGKQ
201: LVQASSFHSV SPSSGDTGVK LIQGSGAILS PGVSANSNPF MSQSLAMVPP ETWLQNEREL KRERRKQSNR ESARRSRLRK QAETEELARK VEALTAENMA
301: LRSELNQLNE KSDKLRGANA TLLDKLKCSE PEKRVPANML SRVKNSGAGD KNKNQGDNDS NSTSKLHQLL DTKPRAKAVA AG
101: PQGQKDPPLT TPGTLLSIDT PTKSTGNTDN GLMKKLKEFD GLAMSLGNGN PENGADEHKR SRNSSETDGS TDGSDGNTTG ADEPKLKRSR EGTPTKDGKQ
201: LVQASSFHSV SPSSGDTGVK LIQGSGAILS PGVSANSNPF MSQSLAMVPP ETWLQNEREL KRERRKQSNR ESARRSRLRK QAETEELARK VEALTAENMA
301: LRSELNQLNE KSDKLRGANA TLLDKLKCSE PEKRVPANML SRVKNSGAGD KNKNQGDNDS NSTSKLHQLL DTKPRAKAVA AG
Arabidopsis Description
GBF3G-box-binding factor 3 [Source:UniProtKB/Swiss-Prot;Acc:P42776]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.