Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os02t0128200-01 | |
| Os12t0233800-02 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d043992_P001 | Maize | nucleus | 66.11 | 63.13 |
| Os05t0569300-01 | Rice | nucleus | 60.0 | 56.84 |
| KXG33037 | Sorghum | nucleus | 65.28 | 47.38 |
| GSMUA_Achr6P32000_001 | Banana | nucleus | 42.5 | 40.58 |
| GSMUA_Achr9P05310_001 | Banana | nucleus | 45.28 | 39.18 |
| CDX95685 | Canola | nucleus | 29.17 | 35.0 |
| AT2G46270.1 | Thale cress | nucleus | 36.94 | 34.82 |
| VIT_15s0046g01440.t01 | Wine grape | nucleus | 41.39 | 34.65 |
| Bra004550.1-P | Field mustard | nucleus | 36.39 | 34.56 |
| GSMUA_Achr1P05050_001 | Banana | nucleus | 40.28 | 34.04 |
| KRH68860 | Soybean | nucleus | 39.72 | 33.65 |
| KRG97109 | Soybean | nucleus | 39.44 | 33.41 |
| CDY07176 | Canola | nucleus | 33.33 | 33.06 |
| Bra037382.1-P | Field mustard | nucleus | 33.33 | 32.7 |
| KRH06537 | Soybean | nucleus | 38.33 | 32.55 |
| CDY48506 | Canola | nucleus | 32.78 | 32.33 |
| KRH47979 | Soybean | nucleus | 37.78 | 32.08 |
| AT4G01120.1 | Thale cress | nucleus | 31.67 | 31.67 |
| Solyc01g095460.2.1 | Tomato | nucleus | 36.67 | 31.58 |
| CDY42029 | Canola | nucleus | 36.11 | 31.4 |
| PGSC0003DMT400000266 | Potato | nucleus | 35.83 | 30.94 |
| CDX80004 | Canola | golgi | 36.39 | 29.57 |
| PGSC0003DMT400084203 | Potato | nucleus | 33.89 | 29.54 |
| VIT_02s0025g01020.t01 | Wine grape | nucleus | 32.22 | 29.15 |
| Solyc05g050220.2.1 | Tomato | nucleus | 33.33 | 28.85 |
| Os02t0128200-01 | Rice | nucleus | 26.67 | 27.67 |
| Os03t0239400-01 | Rice | nucleus | 28.33 | 26.63 |
| Os03t0809200-01 | Rice | cytosol, nucleus | 6.67 | 24.49 |
| Os07t0209800-01 | Rice | nucleus | 25.0 | 23.2 |
| Os12t0233800-02 | Rice | nucleus | 16.94 | 19.61 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | EntrezGene:4327165 | EMBL:AY333184 | ProteinID:BAF05680.1 | ProteinID:BAS73521.1 |
| ncoils:Coil | ProteinID:EEE55116.1 | GO:GO:0000976 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR004827 | InterPro:MFMR | EnsemblPlantsGene:Os01g0658900 | EnsemblPlants:Os01t0658900-01 |
| PFAM:PF00170 | PFAM:PF07777 | ScanProsite:PS00036 | PFscan:PS50217 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF345 |
| UniProt:Q7E0Y1 | SMART:SM00338 | SUPFAM:SSF57959 | UniParc:UPI000009DF3A | RefSeq:XP_015650461.1 | RefSeq:XP_015650471.1 |
| InterPro:bZIP | SEG:seg | : | : | : | : |
Description
BZIP PROTEIN 8OSBZ8. (Os01t0658900-01)
Coordinates
chr1:-:26800095..26805467
Molecular Weight (calculated)
38555.7 Da
IEP (calculated)
9.663
GRAVY (calculated)
-0.664
Length
360 amino acids
Sequence
(BLAST)
(BLAST)
001: MGNDEAVVTQ KMGKAPSPPK DHPALSPYLD WSNMQAYYGP GILPPTFFSP GIAAGHTPPP FILGPQPLVP SAFGKPYAAI YPPGGAFSHP FMPLMVSPLS
101: MEPAKSVNSK DSCSNKKMKE IDGAAVSTGS GNSEKTSGDC SLEGSSDGNN QKASGTPKKR SIDDRPKSGV ETGGALTPND RPSEQAALPN LCIPVTAIKP
201: DVSTASDFRV IATPVTEVPT KDDKESKRER RKQSNRESAR RSRLRKQAET EELARKVELL TAENTSLRRE ISRLTESSKK LRLENSALME KLTETGPDEA
301: QEVPPVKTKA QQARGVENFL SMIDKTGTPR SSGHMDHAIA TPKLRQLLGS GLATDAVAAR
101: MEPAKSVNSK DSCSNKKMKE IDGAAVSTGS GNSEKTSGDC SLEGSSDGNN QKASGTPKKR SIDDRPKSGV ETGGALTPND RPSEQAALPN LCIPVTAIKP
201: DVSTASDFRV IATPVTEVPT KDDKESKRER RKQSNRESAR RSRLRKQAET EELARKVELL TAENTSLRRE ISRLTESSKK LRLENSALME KLTETGPDEA
301: QEVPPVKTKA QQARGVENFL SMIDKTGTPR SSGHMDHAIA TPKLRQLLGS GLATDAVAAR
001: MGNSSEEPKP PTKSDKPSSP PVDQTNVHVY PDWAAMQAYY GPRVAMPPYY NSAMAASGHP PPPYMWNPQH MMSPYGAPYA AVYPHGGGVY AHPGIPMGSL
101: PQGQKDPPLT TPGTLLSIDT PTKSTGNTDN GLMKKLKEFD GLAMSLGNGN PENGADEHKR SRNSSETDGS TDGSDGNTTG ADEPKLKRSR EGTPTKDGKQ
201: LVQASSFHSV SPSSGDTGVK LIQGSGAILS PGVSANSNPF MSQSLAMVPP ETWLQNEREL KRERRKQSNR ESARRSRLRK QAETEELARK VEALTAENMA
301: LRSELNQLNE KSDKLRGANA TLLDKLKCSE PEKRVPANML SRVKNSGAGD KNKNQGDNDS NSTSKLHQLL DTKPRAKAVA AG
101: PQGQKDPPLT TPGTLLSIDT PTKSTGNTDN GLMKKLKEFD GLAMSLGNGN PENGADEHKR SRNSSETDGS TDGSDGNTTG ADEPKLKRSR EGTPTKDGKQ
201: LVQASSFHSV SPSSGDTGVK LIQGSGAILS PGVSANSNPF MSQSLAMVPP ETWLQNEREL KRERRKQSNR ESARRSRLRK QAETEELARK VEALTAENMA
301: LRSELNQLNE KSDKLRGANA TLLDKLKCSE PEKRVPANML SRVKNSGAGD KNKNQGDNDS NSTSKLHQLL DTKPRAKAVA AG
Arabidopsis Description
GBF3G-box-binding factor 3 [Source:UniProtKB/Swiss-Prot;Acc:P42776]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.