Factsheet for Zm00001d043992_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d015118_P001
Zm00001d024041_P002
Zm00001d039206_P001
Zm00001d041142_P010
Zm00001d053967_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G46270.1	Zm00001d015118_P001	AT1G32150.1	18315949
AT2G46270.1	Zm00001d024041_P002	AT1G32150.1	18315949
AT2G46270.1	Zm00001d039206_P001	AT1G32150.1	18315949
AT2G46270.1	Zm00001d041142_P010	AT1G32150.1	18315949
AT2G46270.1	Zm00001d053967_P001	AT1G32150.1	18315949
AT2G46270.1	Zm00001d015118_P001	AT2G35530.1	18315949
AT2G46270.1	Zm00001d024041_P002	AT2G35530.1	18315949
AT2G46270.1	Zm00001d039206_P001	AT2G35530.1	18315949
AT2G46270.1	Zm00001d041142_P010	AT2G35530.1	18315949
AT2G46270.1	Zm00001d053967_P001	AT2G35530.1	18315949
AT4G01120.1	Zm00001d015118_P001	AT1G32150.1	18315949
AT4G01120.1	Zm00001d024041_P002	AT1G32150.1	18315949
AT4G01120.1	Zm00001d039206_P001	AT1G32150.1	18315949
AT4G01120.1	Zm00001d041142_P010	AT1G32150.1	18315949
AT4G01120.1	Zm00001d053967_P001	AT1G32150.1	18315949
AT4G01120.1	Zm00001d015118_P001	AT2G35530.1	18315949
AT4G01120.1	Zm00001d024041_P002	AT2G35530.1	18315949
AT4G01120.1	Zm00001d039206_P001	AT2G35530.1	18315949
AT4G01120.1	Zm00001d041142_P010	AT2G35530.1	18315949
AT4G01120.1	Zm00001d053967_P001	AT2G35530.1	18315949

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0658900-01	Rice	nucleus	63.13	66.11
KXG33037	Sorghum	nucleus	81.43	61.9
Zm00001d039065_P006	Maize	nucleus	50.13	50.13
Zm00001d040500_P001	Maize	nucleus	23.34	45.36
Zm00001d025638_P001	Maize	nucleus	22.28	43.98
Zm00001d043908_P001	Maize	nucleus	22.28	43.98
GSMUA_Achr6P32000_001	Banana	nucleus	39.26	39.26
GSMUA_Achr9P05310_001	Banana	nucleus	39.79	36.06
AT2G46270.1	Thale cress	nucleus	35.54	35.08
KRG97109	Soybean	nucleus	39.52	35.06
CDX95685	Canola	nucleus	27.85	35.0
Bra004550.1-P	Field mustard	nucleus	35.01	34.83
KRH68860	Soybean	nucleus	39.26	34.82
VIT_15s0046g01440.t01	Wine grape	nucleus	39.52	34.65
GSMUA_Achr1P05050_001	Banana	nucleus	38.2	33.8
PGSC0003DMT400000266	Potato	nucleus	36.87	33.33
Solyc01g095460.2.1	Tomato	nucleus	36.6	33.01
CDY07176	Canola	nucleus	31.57	32.78
AT4G01120.1	Thale cress	nucleus	31.3	32.78
Bra037382.1-P	Field mustard	nucleus	31.83	32.7
KRH06537	Soybean	nucleus	36.6	32.55
CDY42029	Canola	nucleus	35.54	32.37
KRH47979	Soybean	nucleus	36.07	32.08
CDY48506	Canola	nucleus	31.03	32.05
PGSC0003DMT400084203	Potato	nucleus	34.22	31.23
CDX80004	Canola	golgi	35.54	30.25
Solyc05g050220.2.1	Tomato	nucleus	32.63	29.57
VIT_02s0025g01020.t01	Wine grape	nucleus	30.24	28.64
Zm00001d024285_P001	Maize	nucleus	14.85	26.29
Zm00001d041142_P010	Maize	nucleus	26.26	25.92
Zm00001d053967_P001	Maize	nucleus	20.69	24.84
Zm00001d015118_P001	Maize	nucleus	18.04	23.45
Zm00001d005244_P002	Maize	nucleus	23.61	23.42
Zm00001d034571_P001	Maize	nucleus	21.22	22.47
Zm00001d019166_P002	Maize	nucleus	23.08	22.42
Zm00001d047967_P003	Maize	nucleus	23.61	21.04
Zm00001d039206_P001	Maize	nucleus	10.88	19.71
Zm00001d024041_P002	Maize	nucleus	16.71	18.31
Zm00001d028372_P005	Maize	nucleus	26.53	16.5

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	UniProt:A0A1D6NGU9	ncoils:Coil	GO:GO:0000976	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR004827	InterPro:MFMR
ProteinID:ONM39634.1	PFAM:PF00170	PFAM:PF07777	ScanProsite:PS00036	PFscan:PS50217	PANTHER:PTHR22952
PANTHER:PTHR22952:SF345	SMART:SM00338	SUPFAM:SSF57959	UniParc:UPI0008439F76	EnsemblPlantsGene:Zm00001d043992	EnsemblPlants:Zm00001d043992_P001
EnsemblPlants:Zm00001d043992_T001	InterPro:bZIP	SEG:seg	:	:	:

Description

bZIP transcription factor1 bZIP transcription factor1

Coordinates

chr3:+:215850507..215866477

Molecular Weight (calculated)

40293.1 Da

IEP (calculated)

9.512

GRAVY (calculated)

-0.736

Length

377 amino acids

Sequence
(BLAST)

001: MPIMPDISGP RSHSHSQKNM GHDEAVVTQN SVKAPSPPKD QPAIYPCFDW STVQAYYGPG VLPPAFFNPG IAPGHAPPPY VWGPQTMPPA AFGKSYAAIY
101: PHAGGFLHPL MPLVVNPLSA EPAKSGNSKD NSLNKKLKEI DGSAVSSGNS EKTSGDHSLE GSSDGNNPKV SGTPKKRSLD DRTTSETCGE SGRLPALSSV
201: RIPDTMMKPC VSTGSDFKVS GATSTEWPAK DDKESKRERR KQSNRESARR SRLRKQAETE ELARRVELLT AENTSLRSEI SRLTESSQKL RMENSALMEK
301: LADGTSDQAQ EASAGHQTTP TAPSSARVVK NFLWMMDGEG ASRGGSGSSS RRRDHGAPML RQLLSSGPLA ADAVAAS

Best Arabidopsis Sequence Match ( AT2G46270.1 )
(BLAST)

001: MGNSSEEPKP PTKSDKPSSP PVDQTNVHVY PDWAAMQAYY GPRVAMPPYY NSAMAASGHP PPPYMWNPQH MMSPYGAPYA AVYPHGGGVY AHPGIPMGSL
101: PQGQKDPPLT TPGTLLSIDT PTKSTGNTDN GLMKKLKEFD GLAMSLGNGN PENGADEHKR SRNSSETDGS TDGSDGNTTG ADEPKLKRSR EGTPTKDGKQ
201: LVQASSFHSV SPSSGDTGVK LIQGSGAILS PGVSANSNPF MSQSLAMVPP ETWLQNEREL KRERRKQSNR ESARRSRLRK QAETEELARK VEALTAENMA
301: LRSELNQLNE KSDKLRGANA TLLDKLKCSE PEKRVPANML SRVKNSGAGD KNKNQGDNDS NSTSKLHQLL DTKPRAKAVA AG

Arabidopsis Description

GBF3G-box-binding factor 3 [Source:UniProtKB/Swiss-Prot;Acc:P42776]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.