Factsheet for Zm00001d019166_P002

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d005244_P002	Maize	nucleus	85.57	87.37
Os07t0209800-01	Rice	nucleus	77.32	77.32
TraesCS2B01G269600.2	Wheat	nucleus	72.94	74.87
TraesCS2D01G236200.3	Wheat	nucleus	72.42	74.14
TraesCS2A01G245700.2	Wheat	nucleus	72.16	74.07
HORVU2Hr1G055230.2	Barley	nucleus	23.97	67.39
HORVU2Hr1G055160.2	Barley	extracellular, mitochondrion, plastid, vacuole	47.94	56.71
Zm00001d034571_P001	Maize	nucleus	49.48	53.93
OQU88693	Sorghum	nucleus	83.51	49.09
Zm00001d024285_P001	Maize	nucleus	22.42	40.85
GSMUA_Achr9P09280_001	Banana	nucleus	9.28	38.71
GSMUA_Achr6P00170_001	Banana	nucleus	34.28	35.47
GSMUA_Achr4P33130_001	Banana	nucleus	32.73	34.51
Zm00001d039206_P001	Maize	nucleus	17.01	31.73
Zm00001d053967_P001	Maize	nucleus	24.74	30.57
Zm00001d015118_P001	Maize	nucleus	22.16	29.66
Zm00001d041142_P010	Maize	nucleus	28.87	29.32
Zm00001d040500_P001	Maize	nucleus	12.89	25.77
Zm00001d025638_P001	Maize	nucleus	12.37	25.13
Zm00001d043908_P001	Maize	nucleus	12.37	25.13
Zm00001d043992_P001	Maize	nucleus	22.42	23.08
Zm00001d024041_P002	Maize	nucleus	20.36	22.97
Zm00001d039065_P006	Maize	nucleus	21.91	22.55
Zm00001d047967_P003	Maize	nucleus	22.68	20.8
Zm00001d028372_P005	Maize	nucleus	25.0	16.01

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	UniProt:A0A1D6HVZ1	ncoils:Coil	GO:GO:0003674	GO:GO:0003700
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
InterPro:IPR004827	ProteinID:ONM52400.1	PFAM:PF00170	PFAM:PF16596	ScanProsite:PS00036	PFscan:PS50217
PANTHER:PTHR22952	PANTHER:PTHR22952:SF125	SMART:SM00338	SUPFAM:SSF57959	UniParc:UPI0008454D5C	EnsemblPlantsGene:Zm00001d019166
EnsemblPlants:Zm00001d019166_P002	EnsemblPlants:Zm00001d019166_T002	InterPro:bZIP	SEG:seg	:	:

Description

EM binding protein1 homologue EM binding protein1 homologue

Coordinates

chr7:+:19967615..19972464

Molecular Weight (calculated)

40516.7 Da

IEP (calculated)

6.141

GRAVY (calculated)

-0.660

Length

388 amino acids

Sequence
(BLAST)

001: MASSSDEQSK PPEPPAAAAV VTAAAPPQTH AEWVASLQAY YAAAGHPYAW PAQHLMAAAA AGAHFGTPVP FPVYHPGAAA AYYAHASMAA ASTCALPSEL
101: GFDLEAFLGV PYPTCEAVPA VALPTVPEGK GKGKGGGASP EKGSSGAPSG EDASRSDDSG SDESSETRDD DTDHKDSSAP KKRKSGNTSA EGEPSQATVV
201: RYAAVESPYP AKGRSASKLP VSAPGRAALP SATPNLNIGM DIWNASPALA VPAVQGEDER EIKRERRKQS NRESARRSRL RKQQECEELA RKVADLTTEN
301: SALRAELDNL KKACQDMEAE NSRLLGGVAD AQVPSVTTTL GMSIEPPKLQ LQLQQHHDEE GQLHKKSSNN SNGNCAGGSH KPEANTTR

Best Arabidopsis Sequence Match ( AT4G36730.1 )
(BLAST)

001: MGTSEDKMPF KTTKPTSSAQ EVPPTPYPDW QNSMQAYYGG GGTPNPFFPS PVGSPSPHPY MWGAQHHMMP PYGTPVPYPA MYPPGAVYAH PSMPMPPNSG
101: PTNKEPAKDQ ASGKKSKGNS KKKAEGGDKA LSGSGNDGAS HSDESVTAGS SDENDENANQ QEQGSIRKPS FGQMLADASS QSTTGEIQGS VPMKPVAPGT
201: NLNIGMDLWS SQAGVPVKDE RELKRQKRKQ SNRESARRSR LRKQAECEQL QQRVESLSNE NQSLRDELQR LSSECDKLKS ENNSIQDELQ RVLGAEAVAN
301: LEQNAAGSKD GEGTN

Arabidopsis Description

GBF1Z-box binding factor 2 protein [Source:UniProtKB/TrEMBL;Acc:Q5K1L6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.