Factsheet for Zm00001d005244_P002

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d019166_P002	Maize	nucleus	87.37	85.57
Os07t0209800-01	Rice	nucleus	81.58	79.9
TraesCS2B01G269600.2	Wheat	nucleus	77.11	77.51
TraesCS2D01G236200.3	Wheat	nucleus	76.58	76.78
TraesCS2A01G245700.2	Wheat	nucleus	76.32	76.72
HORVU2Hr1G055230.2	Barley	nucleus	25.26	69.57
HORVU2Hr1G055160.2	Barley	extracellular, mitochondrion, plastid, vacuole	52.37	60.67
Zm00001d034571_P001	Maize	nucleus	51.05	54.49
OQU88693	Sorghum	nucleus	89.74	51.67
Zm00001d024285_P001	Maize	nucleus	23.16	41.31
GSMUA_Achr9P09280_001	Banana	nucleus	9.47	38.71
GSMUA_Achr6P00170_001	Banana	nucleus	35.26	35.73
GSMUA_Achr4P33130_001	Banana	nucleus	32.89	33.97
Zm00001d039206_P001	Maize	nucleus	18.16	33.17
Zm00001d053967_P001	Maize	nucleus	26.32	31.85
Zm00001d015118_P001	Maize	nucleus	23.95	31.38
Zm00001d041142_P010	Maize	nucleus	30.0	29.84
Zm00001d040500_P001	Maize	nucleus	13.68	26.8
Zm00001d025638_P001	Maize	nucleus	13.16	26.18
Zm00001d043908_P001	Maize	nucleus	13.16	26.18
Zm00001d024041_P002	Maize	nucleus	21.58	23.84
Zm00001d039065_P006	Maize	nucleus	23.42	23.61
Zm00001d043992_P001	Maize	nucleus	23.42	23.61
Zm00001d047967_P003	Maize	nucleus	24.47	21.99
Zm00001d028372_P005	Maize	nucleus	27.11	17.0

Protein Annotations

Gene3D:1.20.5.170	EntrezGene:100284949	MapMan:15.5.4.1	UniProt:A0A1D6ELA3	ncoils:Coil	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR004827	ProteinID:ONM20673.1
PFAM:PF00170	PFAM:PF16596	ScanProsite:PS00036	PFscan:PS50217	PANTHER:PTHR22952	PANTHER:PTHR22952:SF125
SMART:SM00338	SUPFAM:SSF57959	UniParc:UPI000845752E	EnsemblPlantsGene:Zm00001d005244	EnsemblPlants:Zm00001d005244_P002	EnsemblPlants:Zm00001d005244_T002
InterPro:bZIP	SEG:seg	:	:	:	:

Description

bZIP-transcription factor 86G-box-binding factor 1

Coordinates

chr2:-:165521128..165527154

Molecular Weight (calculated)

39719.8 Da

IEP (calculated)

7.799

GRAVY (calculated)

-0.752

Length

380 amino acids

Sequence
(BLAST)

001: MASSSDEQPK PPEPPAAAVV AAPPQTHAEW AASLQAYYAA AGHPYAWPAQ HLMAAAAAGA PFGTPVPFPV YHPGAAAAYY AHASMAAVSV PPHLALSRPG
101: VPYPTSEAVA TVAAATAPEG KGKGKGGGAS PEKGSSGAPS GEDDSRSSDS GSDESSETRD DDTDHKGSSA PKKRKSGNTS AEGEPSQAAV VRYATVESPY
201: PAKGRSASKL PVSAPGRAAL PSATPNLNIG MDIWNTSPAL AVPAVQGEAN PGLALARRDS VTQLDERELK RERRKQSNRE SARRSRLRKQ QECEELARKV
301: ADLTTENSAL RAELDNLRKA CQDMEAENSR LLVPSVTTTL GMSIEPPKAQ QHHDDEGQLH KKSSNNSNGK GSHKPEANTR

Best Arabidopsis Sequence Match ( AT4G36730.2 )
(BLAST)

001: MGTSEDKMPF KTTKPTSSAQ EVPPTPYPDW QNSMQAYYGG GGTPNPFFPS PVGSPSPHPY MWGAQHHMMP PYGTPVPYPA MYPPGAVYAH PSMPMPPNSG
101: PTNKEPAKDQ ASGKKSKGNS KKKAEGGDKA LSGSGNDGAS HSDESVTAGS SDENDENANQ QGSIRKPSFG QMLADASSQS TTGEIQGSVP MKPVAPGTNL
201: NIGMDLWSSQ AGVPVKDERE LKRQKRKQSN RESARRSRLR KQAECEQLQQ RVESLSNENQ SLRDELQRLS SECDKLKSEN NSIQDELQRV LGAEAVANLE
301: QNAAGSKDGE GTN

Arabidopsis Description

GBF1Z-box binding factor 2 protein [Source:UniProtKB/TrEMBL;Acc:Q5K1L6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.