Factsheet for GSMUA_Achr4P33130_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 1
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P00170_001	Banana	nucleus	66.85	65.6
GSMUA_Achr9P09280_001	Banana	nucleus	11.14	44.09
HORVU2Hr1G055230.2	Barley	nucleus	13.32	35.51
Os07t0209800-01	Rice	nucleus	36.14	34.28
TraesCS2A01G245700.2	Wheat	nucleus	34.24	33.33
TraesCS2B01G269600.2	Wheat	nucleus	33.97	33.07
Zm00001d005244_P002	Maize	nucleus	33.97	32.89
Zm00001d019166_P002	Maize	nucleus	34.51	32.73
TraesCS2D01G236200.3	Wheat	nucleus	33.7	32.72
Zm00001d024285_P001	Maize	nucleus	18.75	32.39
GSMUA_Achr4P04530_001	Banana	nucleus	33.97	30.27
TraesCS5A01G460800.2	Wheat	nucleus	29.08	30.06
OQU90776	Sorghum	nucleus, plastid	24.73	29.93
TraesCS5D01G473000.1	Wheat	nucleus	29.35	29.83
TraesCS5B01G470600.1	Wheat	nucleus	28.8	29.69
Os03t0809200-01	Rice	cytosol, nucleus	7.88	29.59
GSMUA_Achr6P01090_001	Banana	nucleus	33.15	29.54
GSMUA_Achr4P18980_001	Banana	nucleus	32.07	29.28
GSMUA_Achr5P14150_001	Banana	nucleus	31.79	29.1
Zm00001d034571_P001	Maize	nucleus	27.99	28.93
GSMUA_Achr4P11610_001	Banana	nucleus	23.1	28.52
GSMUA_Achr6P32000_001	Banana	nucleus	28.8	28.12
GSMUA_AchrUn_...	Banana	nucleus	28.8	27.82
HORVU0Hr1G013950.21	Barley	nucleus	26.09	27.35
GSMUA_Achr4P27400_001	Banana	nucleus	29.62	26.52
GSMUA_Achr9P05310_001	Banana	nucleus	27.45	24.28
TraesCS3B01G545800.1	Wheat	nucleus	14.4	22.94
HORVU2Hr1G055160.2	Barley	extracellular, mitochondrion, plastid, vacuole	20.38	22.87
GSMUA_Achr1P05050_001	Banana	nucleus	26.09	22.54
OQU88693	Sorghum	nucleus	35.05	19.55

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:GSMUA_Achr4G33130_001	EnsemblPlants:GSMUA_Achr4P33130_001	EnsemblPlants:GSMUA_Achr4T33130_001	InterPro:IPR004827
InterPro:Leuzip_CREB	UniProt:M0SU75	InterPro:MFMR	PFAM:PF00170	PFAM:PF07777	PFAM:PF16596
PRINTS:PR00041	ScanProsite:PS00036	PFscan:PS50217	PANTHER:PTHR22952	PANTHER:PTHR22952:SF123	SMART:SM00338
SUPFAM:SSF57959	UniParc:UPI000295C148	InterPro:bZIP	SEG:seg	:	:

Description

Putative G-box-binding factor 1 [Source:GMGC_GENE;Acc:GSMUA_Achr4G33130_001]

Coordinates

chr4:-:29625450..29632446

Molecular Weight (calculated)

40118.0 Da

IEP (calculated)

9.548

GRAVY (calculated)

-0.827

Length

368 amino acids

Sequence
(BLAST)

001: MNIEQIFKKI HLFRVFLSKC SHFRNLLTPT QEPPTPIPPA TTSVLPEWSA SLQAFYGRGA AAMMPQAFYP PPPIAAPQPV VWGAQQVMPP YGSPIAYASF
101: YPHGGFFAQP PMNAAMAYRT PETQGRPPEA KDKQITSKGT SKDGGELTGK WGNGGKGTSG AAENSSQSDD SATEGSSDTR EDGSQPKDHS LARKRSYGNM
201: IAEGEASHPL DTAEHSGANA ESTYSGRSRT AKKLPVSAPG RATLPGSQTN LNIGMDFWGA THAGSVPMKD DRELRREKRK QSNRESARRS RLRKQQECEE
301: LARRVTDLES ENSALRVEIE SLKKLRGELK AENKSIMEKL KQRYGPENFS ELGISIDPSK LEPDGASG

Best Arabidopsis Sequence Match ( AT4G36730.1 )
(BLAST)

001: MGTSEDKMPF KTTKPTSSAQ EVPPTPYPDW QNSMQAYYGG GGTPNPFFPS PVGSPSPHPY MWGAQHHMMP PYGTPVPYPA MYPPGAVYAH PSMPMPPNSG
101: PTNKEPAKDQ ASGKKSKGNS KKKAEGGDKA LSGSGNDGAS HSDESVTAGS SDENDENANQ QEQGSIRKPS FGQMLADASS QSTTGEIQGS VPMKPVAPGT
201: NLNIGMDLWS SQAGVPVKDE RELKRQKRKQ SNRESARRSR LRKQAECEQL QQRVESLSNE NQSLRDELQR LSSECDKLKS ENNSIQDELQ RVLGAEAVAN
301: LEQNAAGSKD GEGTN

Arabidopsis Description

GBF1Z-box binding factor 2 protein [Source:UniProtKB/TrEMBL;Acc:Q5K1L6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.