Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G460800.2 | Wheat | nucleus | 97.2 | 97.47 |
| TraesCS3B01G545800.1 | Wheat | nucleus | 57.42 | 88.74 |
| HORVU0Hr1G013950.21 | Barley | nucleus | 80.95 | 82.34 |
| Zm00001d034571_P001 | Maize | nucleus | 53.5 | 53.65 |
| OQU90776 | Sorghum | nucleus, plastid | 44.82 | 52.63 |
| TraesCS2B01G269600.2 | Wheat | nucleus | 52.1 | 49.21 |
| Os03t0809200-01 | Rice | cytosol, nucleus | 12.89 | 46.94 |
| Zm00001d024285_P001 | Maize | nucleus | 22.41 | 37.56 |
| GSMUA_Achr9P09280_001 | Banana | nucleus | 8.96 | 34.41 |
| GSMUA_Achr6P00170_001 | Banana | nucleus | 31.65 | 30.13 |
| GSMUA_Achr4P33130_001 | Banana | nucleus | 29.69 | 28.8 |
| TraesCS6B01G110100.1 | Wheat | nucleus | 26.89 | 27.51 |
| TraesCS5B01G122000.2 | Wheat | nucleus | 27.45 | 25.26 |
| TraesCS4B01G229100.2 | Wheat | nucleus | 24.65 | 21.78 |
| TraesCS1B01G439800.1 | Wheat | nucleus | 23.81 | 21.09 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR004827 |
| PFAM:PF00170 | ScanProsite:PS00036 | PFscan:PS50217 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF125 | SMART:SM00338 |
| SUPFAM:SSF57959 | EnsemblPlantsGene:TraesCS5B01G470600 | EnsemblPlants:TraesCS5B01G470600.1 | InterPro:bZIP | TIGR:cd14702 | SEG:seg |
Description
No Description!
Coordinates
chr5B:-:643978803..643981862
Molecular Weight (calculated)
36706.4 Da
IEP (calculated)
8.967
GRAVY (calculated)
-0.696
Length
357 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSSATSGD DRPPAAGGGG GTPAQAHAEW AASMHAYYAA AASAAGHPYA AWPLPPQAQQ HGLVAAGPGA AYGAPVPFPM YHHPAAAYYA HAHASMAAGV
101: PYMAGESASA AGKGKRAGKT RRVPSGEINS SSGSGDAGSQ GSSEKGNAGA NQKGSSSSAK RRKSGAANTE GEPSQATTVQ NAVTEPPLED KERSASKLLV
201: LAPGRAALTS AAPNLNIGMD PLSASPSSLV QGEVNAAASS QSNASLSQMD ERELKRERRK QSNRESARRS RLRKQQECEE LAQKVSELTA ANGTLRSELD
301: QLKKDCKTME TENKQLMGKI LSHDDKMQQS EGPSVVTTLS IQVEAPDPHQ GGDGKAS
101: PYMAGESASA AGKGKRAGKT RRVPSGEINS SSGSGDAGSQ GSSEKGNAGA NQKGSSSSAK RRKSGAANTE GEPSQATTVQ NAVTEPPLED KERSASKLLV
201: LAPGRAALTS AAPNLNIGMD PLSASPSSLV QGEVNAAASS QSNASLSQMD ERELKRERRK QSNRESARRS RLRKQQECEE LAQKVSELTA ANGTLRSELD
301: QLKKDCKTME TENKQLMGKI LSHDDKMQQS EGPSVVTTLS IQVEAPDPHQ GGDGKAS
001: MGTSEDKMPF KTTKPTSSAQ EVPPTPYPDW QNSMQAYYGG GGTPNPFFPS PVGSPSPHPY MWGAQHHMMP PYGTPVPYPA MYPPGAVYAH PSMPMPPNSG
101: PTNKEPAKDQ ASGKKSKGNS KKKAEGGDKA LSGSGNDGAS HSDESVTAGS SDENDENANQ QGSIRKPSFG QMLADASSQS TTGEIQGSVP MKPVAPGTNL
201: NIGMDLWSSQ AGVPVKDERE LKRQKRKQSN RESARRSRLR KQAECEQLQQ RVESLSNENQ SLRDELQRLS SECDKLKSEN NSIQDELQRV LGAEAVANLE
301: QNAAGSKDGE GTN
101: PTNKEPAKDQ ASGKKSKGNS KKKAEGGDKA LSGSGNDGAS HSDESVTAGS SDENDENANQ QGSIRKPSFG QMLADASSQS TTGEIQGSVP MKPVAPGTNL
201: NIGMDLWSSQ AGVPVKDERE LKRQKRKQSN RESARRSRLR KQAECEQLQQ RVESLSNENQ SLRDELQRLS SECDKLKSEN NSIQDELQRV LGAEAVANLE
301: QNAAGSKDGE GTN
Arabidopsis Description
GBF1Z-box binding factor 2 protein [Source:UniProtKB/TrEMBL;Acc:Q5K1L6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.