Skip to main content
crop-pal logo
Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 3
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5B01G470600.1 Wheat nucleus 97.47 97.2
TraesCS5D01G473000.1 Wheat nucleus 96.91 95.3
HORVU0Hr1G013950.21 Barley nucleus 81.18 82.34
Zm00001d034571_P001 Maize nucleus 54.21 54.21
OQU90776 Sorghum nucleus, plastid 45.22 52.96
TraesCS2A01G245700.2 Wheat nucleus 51.97 48.94
Os03t0809200-01 Rice cytosol, nucleus 12.64 45.92
Zm00001d024285_P001 Maize nucleus 22.75 38.03
GSMUA_Achr9P09280_001 Banana nucleus 9.27 35.48
GSMUA_Achr6P00170_001 Banana nucleus 32.02 30.4
GSMUA_Achr4P33130_001 Banana nucleus 30.06 29.08
TraesCS6A01G087400.2 Wheat nucleus 26.97 27.67
TraesCS5A01G115300.2 Wheat nucleus 27.53 25.26
TraesCS1A01G409800.2 Wheat nucleus 24.44 22.77
TraesCS4A01G073000.4 Wheat nucleus 24.16 21.29
Protein Annotations
Gene3D:1.20.5.170MapMan:15.5.4.1ncoils:CoilGO:GO:0003674GO:GO:0003700GO:GO:0006139
GO:GO:0006355GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987InterPro:IPR004827
PFAM:PF00170ScanProsite:PS00036PFscan:PS50217PANTHER:PTHR22952PANTHER:PTHR22952:SF125SMART:SM00338
SUPFAM:SSF57959EnsemblPlantsGene:TraesCS5A01G460800EnsemblPlants:TraesCS5A01G460800.2InterPro:bZIPTIGR:cd14702SEG:seg
Description
No Description!
Coordinates
chr5A:-:641119348..641122354
Molecular Weight (calculated)
36700.5 Da
IEP (calculated)
9.227
GRAVY (calculated)
-0.683
Length
356 amino acids
Sequence
(BLAST)
001: MASSSSATSG DDRPPAAGGG TPAQAHAEWA ASMHAYYAAA ASAAGHPYAA WPLPPQAQQH GLVAAGPGAA YGAPVPFPMY HHPAAAYYAH AHASMAAGVP
101: YMAGESASAA GKGKRVGKTQ RVPSGEINSS SGSGDAGSQG SSEKGDAGAN QKGSSSSAKR RKSGAAKTEG EPSQAATVQN AVTEPPLEDK ERSASKLLVL
201: APGRAALTSA APNLNIGMDP LSASPSSLVQ GEVNAAASSQ SNASLSQMDE RELKRERRKQ SNRESARRSR LRKQQECEEL AQKVSELTAA NGTLRSELDQ
301: LKKDCKTMET ENKKLMGKIL SHDDKMQQSE GPSVVTTLSI QVEAPEPHQG GHGKAS
Best Arabidopsis Sequence Match ( AT4G36730.2 )
(BLAST)
001: MGTSEDKMPF KTTKPTSSAQ EVPPTPYPDW QNSMQAYYGG GGTPNPFFPS PVGSPSPHPY MWGAQHHMMP PYGTPVPYPA MYPPGAVYAH PSMPMPPNSG
101: PTNKEPAKDQ ASGKKSKGNS KKKAEGGDKA LSGSGNDGAS HSDESVTAGS SDENDENANQ QGSIRKPSFG QMLADASSQS TTGEIQGSVP MKPVAPGTNL
201: NIGMDLWSSQ AGVPVKDERE LKRQKRKQSN RESARRSRLR KQAECEQLQQ RVESLSNENQ SLRDELQRLS SECDKLKSEN NSIQDELQRV LGAEAVANLE
301: QNAAGSKDGE GTN
Arabidopsis Description
GBF1Z-box binding factor 2 protein [Source:UniProtKB/TrEMBL;Acc:Q5K1L6]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.