Factsheet for TraesCS4A01G073000.4

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

mitochondrion 2
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G230200.3	Wheat	nucleus	98.02	98.02
TraesCS4B01G229100.2	Wheat	nucleus	96.29	96.29
HORVU4Hr1G064120.18	Barley	nucleus	95.54	95.54
OQU92933	Sorghum	nucleus	79.95	84.56
Os03t0239400-01	Rice	nucleus	78.47	82.77
Zm00001d047967_P003	Maize	nucleus	68.56	65.48
Zm00001d028372_P005	Maize	nucleus	76.98	51.32
TraesCS6A01G087400.2	Wheat	nucleus	35.4	41.21
TraesCS5A01G115300.2	Wheat	nucleus	38.37	39.95
TraesCS1A01G409800.2	Wheat	nucleus	27.48	29.06
TraesCS2A01G245700.2	Wheat	nucleus	23.51	25.13
TraesCS5A01G460800.2	Wheat	nucleus	21.29	24.16

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003700	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR004827
InterPro:MFMR	PFAM:PF00170	PFAM:PF07777	PFAM:PF16596	ScanProsite:PS00036	PFscan:PS50217
PANTHER:PTHR22952	PANTHER:PTHR22952:SF142	SMART:SM00338	SUPFAM:SSF57959	EnsemblPlantsGene:TraesCS4A01G073000	EnsemblPlants:TraesCS4A01G073000.4
InterPro:bZIP	TIGR:cd14702	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr4A:+:71998303..72001378

Molecular Weight (calculated)

43616.7 Da

IEP (calculated)

9.535

GRAVY (calculated)

-0.911

Length

404 amino acids

Sequence
(BLAST)

001: MGKGDVATRS KSQKSSTAQV CVNKLNCMNN YYHYLTLFYL FQNEQSTPTN PRTAYPDWSQ FQAYYNVPGT AQMTPPAYFH STVTPGPQGH PYMWGPQMMP
101: PYGTPPPYTT MYAQGTPYQQ APMPPGSHPY SPYPVQAPNG TVQTPTSGAG GSETDKSNKN KRKTPLKRSK GSLGSLDVVT VKDKTPPAKP LVSSSNEGSS
201: QSESGSGSYS GGSSTNSKSG SHTKDGSEHG PGNDASNKGV TAQGTAVEPT QVSSGPVVLN PMMPYWPVPP PMPGQATGVS MGVDYWGAPT SVPMHGKAVA
301: APTSAPSSNS RDIVLSDPVI QDEREVKKQK RKQSNRESAR RSRLRKQAEW EEVASRADLL KQENSSLKEE LKQLQEKCDN LTSENTSLHE KLKALDSEKP
401: NGNL

Best Arabidopsis Sequence Match ( AT1G32150.1 )
(BLAST)

001: MGSSEMEKSG KEKEPKTTPP STSSSAPATV VSQEPSSAVS AGVAVTQDWS GFQAYSPMPP HGYVASSPQP HPYMWGVQHM MPPYGTPPHP YVTMYPPGGM
101: YAHPSLPPGS YPYSPYAMPS PNGMAEASGN TGSVIEGDGK PSDGKEKLPI KRSKGSLGSL NMIIGKNNEA GKNSGASANG ACSKSAESGS DGSSDGSDAN
201: SQNDSGSRHN GKDGETASES GGSAHGPPRN GSNLPVNQTV AIMPVSATGV PGPPTNLNIG MDYWSGHGNV SGAVPGVVVD GSQSQPWLQV SDEREIKRQR
301: RKQSNRESAR RSRLRKQAEC DELAQRAEVL NGENSSLRAE INKLKSQYEE LLAENSSLKN KFSSAPSLEG GDLDKNEQEP QRSTRQDVA

Arabidopsis Description

BZIP68bZIP transcription factor 68 [Source:UniProtKB/Swiss-Prot;Acc:Q84LG2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.