Factsheet for HORVU0Hr1G013950.21

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus, plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G460800.2	Wheat	nucleus	82.34	81.18
TraesCS5B01G470600.1	Wheat	nucleus	82.34	80.95
TraesCS3B01G545800.1	Wheat	nucleus	52.71	80.09
TraesCS5D01G473000.1	Wheat	nucleus	81.77	79.28
OQU90776	Sorghum	nucleus, plastid	45.87	52.96
Os03t0809200-01	Rice	cytosol, nucleus	13.39	47.96
Zm00001d034571_P001	Maize	nucleus	48.15	47.47
HORVU2Hr1G055230.2	Barley	nucleus	17.09	43.48
Zm00001d024285_P001	Maize	nucleus	21.65	35.68
GSMUA_Achr9P09280_001	Banana	nucleus	8.83	33.33
HORVU2Hr1G055160.2	Barley	extracellular, mitochondrion, plastid, vacuole	30.48	32.62
GSMUA_Achr6P00170_001	Banana	nucleus	28.77	26.93
GSMUA_Achr4P33130_001	Banana	nucleus	27.35	26.09
HORVU6Hr1G016240.10	Barley	nucleus	24.79	24.65
HORVU5Hr1G029130.19	Barley	nucleus	23.08	20.82
HORVU4Hr1G064120.18	Barley	nucleus	22.22	19.31
HORVU1Hr1G090030.11	Barley	nucleus, plastid	21.65	16.63
HORVU1Hr1G089970.10	Barley	cytosol	11.97	11.35

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	UniProt:A0A287E192	ncoils:Coil	GO:GO:0003674	GO:GO:0003700
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
EnsemblPlantsGene:HORVU0Hr1G013950	EnsemblPlants:HORVU0Hr1G013950.21	InterPro:IPR004827	PFAM:PF00170	ScanProsite:PS00036	PFscan:PS50217
PANTHER:PTHR22952	PANTHER:PTHR22952:SF155	SMART:SM00338	SUPFAM:SSF57959	UniParc:UPI000B47B7B7	InterPro:bZIP
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchrUn:-:78087673..78090706

Molecular Weight (calculated)

33044.3 Da

IEP (calculated)

8.788

GRAVY (calculated)

-0.679

Length

351 amino acids

Sequence
(BLAST)

001: REHPKPXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX AAGHPYAAWP VPPQAQHGLV AAGPGAAYGA PVPFPMYHHP AAAYYAHAHA SMAAGVPYMA
101: GESASAAGKR VGKTRRVPSG EINSSSGSGD AGSQGSSEKG DAGANQKGSS SSAKRRKSGA TNTEGEPSQA ATVQNAVTES PVEVKDRCAS KLLVLAPGRA
201: ALTTPAPNLN SGIDPLSASP SSLGQGEVNA AASSQSNASL SQMDERELKR ERRKQSNRES ARRSRLRKQQ ECEELAQKVS ELTAANGTLR SELDQLKEDC
301: KTMEVENKQL MGKILGHDDK MQQSEGPSVV TTLSIQVEPS EPHHGGDGKA T

Best Arabidopsis Sequence Match ( AT4G36730.2 )
(BLAST)

001: MGTSEDKMPF KTTKPTSSAQ EVPPTPYPDW QNSMQAYYGG GGTPNPFFPS PVGSPSPHPY MWGAQHHMMP PYGTPVPYPA MYPPGAVYAH PSMPMPPNSG
101: PTNKEPAKDQ ASGKKSKGNS KKKAEGGDKA LSGSGNDGAS HSDESVTAGS SDENDENANQ QGSIRKPSFG QMLADASSQS TTGEIQGSVP MKPVAPGTNL
201: NIGMDLWSSQ AGVPVKDERE LKRQKRKQSN RESARRSRLR KQAECEQLQQ RVESLSNENQ SLRDELQRLS SECDKLKSEN NSIQDELQRV LGAEAVANLE
301: QNAAGSKDGE GTN

Arabidopsis Description

GBF1Z-box binding factor 2 protein [Source:UniProtKB/TrEMBL;Acc:Q5K1L6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.