Factsheet for HORVU5Hr1G029130.19

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
MultiLoc:	nucleus
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G089970.10
HORVU1Hr1G090030.11
HORVU5Hr1G029130.19
HORVU6Hr1G016240.10

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G32150.1	HORVU5Hr1G029130.19	AT1G32150.1	18315949
AT1G32150.1	HORVU6Hr1G016240.10	AT1G32150.1	18315949
AT1G32150.1	HORVU5Hr1G029130.19	AT2G35530.1	18315949
AT1G32150.1	HORVU6Hr1G016240.10	AT2G35530.1	18315949
AT1G32150.1	HORVU1Hr1G089970.10	AT2G46270.1	18315949
AT1G32150.1	HORVU1Hr1G090030.11	AT2G46270.1	18315949
AT1G32150.1	HORVU1Hr1G089970.10	AT4G01120.1	18315949
AT1G32150.1	HORVU1Hr1G090030.11	AT4G01120.1	18315949
AT2G35530.1	HORVU5Hr1G029130.19	AT1G32150.1	18315949
AT2G35530.1	HORVU6Hr1G016240.10	AT1G32150.1	18315949
AT2G35530.1	HORVU5Hr1G029130.19	AT2G35530.1	18315949
AT2G35530.1	HORVU6Hr1G016240.10	AT2G35530.1	18315949
AT2G35530.1	HORVU1Hr1G089970.10	AT2G46270.1	18315949
AT2G35530.1	HORVU1Hr1G090030.11	AT2G46270.1	18315949
AT2G35530.1	HORVU1Hr1G089970.10	AT4G01120.1	18315949
AT2G35530.1	HORVU1Hr1G090030.11	AT4G01120.1	18315949

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G124600.1	Wheat	nucleus	83.29	83.51
TraesCS5B01G122000.2	Wheat	nucleus	83.29	83.51
TraesCS5A01G115300.2	Wheat	nucleus	83.29	83.51
KXG23316	Sorghum	nucleus	68.89	69.61
Zm00001d041142_P010	Maize	nucleus	66.84	68.06
Os12t0233800-02	Rice	nucleus	51.93	64.95
Zm00001d024041_P002	Maize	nucleus	56.04	63.37
GSMUA_Achr4P11610_001	Banana	nucleus	40.36	52.68
GSMUA_Achr4P04530_001	Banana	nucleus	51.16	48.18
GSMUA_AchrUn_...	Banana	nucleus	46.02	46.98
CDY40465	Canola	nucleus	35.99	46.67
Solyc08g005290.2.1	Tomato	nucleus	47.56	46.6
AT1G32150.1	Thale cress	nucleus	46.53	46.53
VIT_02s0012g02250.t01	Wine grape	nucleus	48.84	46.0
Solyc08g076100.2.1	Tomato	nucleus	48.33	45.97
KRH39598	Soybean	nucleus	48.84	45.89
KRH74331	Soybean	nucleus	48.84	45.78
GSMUA_Achr5P14150_001	Banana	nucleus	46.79	45.27
HORVU6Hr1G016240.10	Barley	nucleus	40.36	44.48
CDY31695	Canola	nucleus	44.99	44.3
KRH07569	Soybean	nucleus	47.3	44.23
GSMUA_Achr4P18980_001	Banana	nucleus	45.5	43.92
KRH45342	Soybean	nucleus	47.04	43.88
AT2G35530.1	Thale cress	nucleus	45.76	43.52
CDY12261	Canola	nucleus	42.42	43.31
GSMUA_Achr6P01090_001	Banana	nucleus	45.24	42.62
CDY22589	Canola	nucleus	41.9	42.56
Bra023243.1-P	Field mustard	nucleus	38.05	42.05
PGSC0003DMT400047522	Potato	nucleus	41.39	41.82
GSMUA_Achr4P27400_001	Banana	nucleus	43.96	41.61
Bra005335.1-P	Field mustard	nucleus	44.73	41.23
Bra023012.1-P	Field mustard	nucleus	41.65	40.2
CDY65764	Canola	nucleus	40.62	39.4
CDX84198	Canola	nucleus	45.24	38.34
Bra017316.1-P	Field mustard	nucleus	25.71	37.88
CDY32123	Canola	nucleus	13.88	35.29
HORVU4Hr1G064120.18	Barley	nucleus	34.7	33.42
CDX84103	Canola	nucleus, plastid	29.05	32.66
HORVU2Hr1G055230.2	Barley	nucleus	10.03	28.26
HORVU0Hr1G013950.21	Barley	nucleus	20.82	23.08
HORVU1Hr1G090030.11	Barley	nucleus, plastid	23.91	20.35
HORVU2Hr1G055160.2	Barley	extracellular, mitochondrion, plastid, vacuole	15.68	18.6
HORVU1Hr1G089970.10	Barley	cytosol	13.37	14.05

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	UniProt:A0A287QSE2	ncoils:Coil	GO:GO:0003674	GO:GO:0003700
GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
EnsemblPlantsGene:HORVU5Hr1G029130	EnsemblPlants:HORVU5Hr1G029130.19	InterPro:IPR004827	InterPro:MFMR	PFAM:PF00170	PFAM:PF07777
PFAM:PF16596	ScanProsite:PS00036	PFscan:PS50217	PANTHER:PTHR22952	PANTHER:PTHR22952:SF47	SMART:SM00338
SUPFAM:SSF57959	UniParc:UPI000B46BF39	InterPro:bZIP	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr5H:-:174822543..174841869

Molecular Weight (calculated)

41357.6 Da

IEP (calculated)

7.685

GRAVY (calculated)

-0.939

Length

389 amino acids

Sequence
(BLAST)

001: MRSSEAETPA KANKASTPQG AATTYFEYNN AHSLPRLDQL SGISSNSTTW VLSLSCGVKP TGSSIHVGAS EPMMPPYGTP PYVIYPPGGV YAHPSMRPGA
101: HPFAPYAMSS SNGNPDATGT TTTPATAGGE TNGKSSDGIE KSPIKRSKGS LGSLNMITGK NCVEHGKTSG ASANGTISQS GESGSESSSE GSEANSQNVD
201: LQHKESGQEQ DGDVRSSQNG VSPSPSQAQL KQTSAIMQMP SSGPVPGPTT NLKIGMDYWA NTASSSPALH GKVTPTAIPG DLAPTEPWMQ DERELKRQKR
301: KQSNRDSARR SRLRKQAECE ELAQRAEVLK QENASLKDEV SRIRKEYDEL LSKNSSLKDN IGDKQHKTDE AGLHNKLQRS GDDNQKDTN

Best Arabidopsis Sequence Match ( AT1G32150.1 )
(BLAST)

001: MGSSEMEKSG KEKEPKTTPP STSSSAPATV VSQEPSSAVS AGVAVTQDWS GFQAYSPMPP HGYVASSPQP HPYMWGVQHM MPPYGTPPHP YVTMYPPGGM
101: YAHPSLPPGS YPYSPYAMPS PNGMAEASGN TGSVIEGDGK PSDGKEKLPI KRSKGSLGSL NMIIGKNNEA GKNSGASANG ACSKSAESGS DGSSDGSDAN
201: SQNDSGSRHN GKDGETASES GGSAHGPPRN GSNLPVNQTV AIMPVSATGV PGPPTNLNIG MDYWSGHGNV SGAVPGVVVD GSQSQPWLQV SDEREIKRQR
301: RKQSNRESAR RSRLRKQAEC DELAQRAEVL NGENSSLRAE INKLKSQYEE LLAENSSLKN KFSSAPSLEG GDLDKNEQEP QRSTRQDVA

Arabidopsis Description

BZIP68bZIP transcription factor 68 [Source:UniProtKB/Swiss-Prot;Acc:Q84LG2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.