Factsheet for Bra023012.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
EpiLoc:	nucleus
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra004550.1-P
Bra005335.1-P
Bra010572.1-P
Bra011701.1-P
Bra017316.1-P
Bra023012.1-P
Bra023243.1-P
Bra037382.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G35530.1	Bra023243.1-P	AT1G32150.1	18315949
AT2G35530.1	Bra005335.1-P	AT2G35530.1	18315949
AT2G35530.1	Bra017316.1-P	AT2G35530.1	18315949
AT2G35530.1	Bra023012.1-P	AT2G35530.1	18315949
AT2G35530.1	Bra004550.1-P	AT2G46270.1	18315949
AT2G35530.1	Bra037382.1-P	AT4G01120.1	18315949
AT2G35530.1	Bra010572.1-P	AT4G36730.1	18315949
AT2G35530.1	Bra011701.1-P	AT4G36730.1	18315949

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY65764	Canola	nucleus	96.53	97.01
AT2G35530.1	Thale cress	nucleus	77.67	76.53
Bra005335.1-P	Field mustard	nucleus	73.2	69.91
Bra023243.1-P	Field mustard	nucleus	54.84	62.78
Bra017316.1-P	Field mustard	nucleus	37.97	57.95
VIT_02s0012g02250.t01	Wine grape	nucleus	57.82	56.42
Solyc08g005290.2.1	Tomato	nucleus	53.85	54.66
KRH39598	Soybean	nucleus	56.08	54.59
KRH74331	Soybean	nucleus	55.58	53.98
Solyc08g076100.2.1	Tomato	nucleus	53.85	53.06
KRH07569	Soybean	nucleus	53.1	51.44
KRH45342	Soybean	nucleus	53.1	51.32
PGSC0003DMT400047522	Potato	nucleus	48.39	50.65
KXG23316	Sorghum	nucleus	45.66	47.79
TraesCS5A01G115300.2	Wheat	nucleus	45.91	47.68
TraesCS5B01G122000.2	Wheat	nucleus	45.91	47.68
TraesCS5D01G124600.1	Wheat	nucleus	45.91	47.68
GSMUA_Achr5P14150_001	Banana	nucleus	47.15	47.26
GSMUA_Achr4P04530_001	Banana	nucleus	47.89	46.73
Zm00001d041142_P010	Maize	nucleus	43.67	46.07
GSMUA_Achr4P11610_001	Banana	nucleus	33.99	45.97
Os12t0233800-02	Rice	nucleus	34.99	45.34
GSMUA_AchrUn_...	Banana	nucleus	41.69	44.09
TraesCSU01G019200.1	Wheat	nucleus	37.72	44.06
TraesCS6B01G110100.1	Wheat	nucleus	37.97	43.84
TraesCS6A01G087400.2	Wheat	nucleus	37.47	43.52
HORVU6Hr1G016240.10	Barley	nucleus	37.47	42.78
GSMUA_Achr6P01090_001	Banana	nucleus	43.67	42.62
EES04440	Sorghum	nucleus	36.97	42.57
Zm00001d015118_P001	Maize	nucleus	30.52	42.41
Os02t0128200-01	Rice	nucleus	36.48	42.36
Zm00001d039206_P001	Maize	nucleus	21.84	42.31
GSMUA_Achr4P18980_001	Banana	nucleus	41.94	41.94
HORVU5Hr1G029130.19	Barley	nucleus	40.2	41.65
GSMUA_Achr4P27400_001	Banana	nucleus	41.44	40.63
Zm00001d053967_P001	Maize	nucleus	30.52	39.17
Zm00001d024041_P002	Maize	nucleus	32.51	38.08
Bra011701.1-P	Field mustard	nucleus	29.28	37.7
Bra010572.1-P	Field mustard	nucleus	28.54	36.74
Bra004550.1-P	Field mustard	nucleus	26.05	27.7
Bra037382.1-P	Field mustard	nucleus	24.07	26.43

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	EnsemblPlantsGene:Bra023012	EnsemblPlants:Bra023012.1	EnsemblPlants:Bra023012.1-P	ncoils:Coil
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR004827
UniProt:M4E2L1	InterPro:MFMR	PFAM:PF00170	PFAM:PF07777	PFAM:PF16596	PFscan:PS50217
PANTHER:PTHR22952	PANTHER:PTHR22952:SF47	SMART:SM00338	SUPFAM:SSF57959	UniParc:UPI000253FE2B	InterPro:bZIP
SEG:seg	:	:	:	:	:

Description

AT2G35530 (E=5e-138) | bZIP transcription factor family protein

Coordinates

chrA03:-:8217783..8220321

Molecular Weight (calculated)

43512.6 Da

IEP (calculated)

6.524

GRAVY (calculated)

-0.896

Length

403 amino acids

Sequence
(BLAST)

001: MASSEMEKPS KEKELKQPSS SSSAPPPSQE PSSSVSAGPD WSGFQASPAP MQPHGFVTSS PQPHPYMWGV QHMMPPYGTP PHPYVTMYPP GGMYAHPSMP
101: PGSYPYSPMP SPNGVTEASG NTTGGTEGDS KRSDVKEKLP IRRSKRILSM MKGKNNEPGK NSGASANVAY SKRHVTFLDC IGESDSDGSS EGSDANYQID
201: LGSSQDGKDA ASENGGSANG LQNGSVGTPL PTVSQKVPIM SKTAPGVPGQ PTNINIGMGY WGAPIPGMHG KVSTPVPGVF AQMSRDGGHS QPWLQDEREL
301: KRQRRKQTNR EAAQRSRLRK EAEFDQLAQY TEVLSAENAS LRAEMNRLKS QREELTSENT SLKDLLLSFP PLEGINMDKD DQEPDTNQTC FTETKFVSYK
401: DST

Best Arabidopsis Sequence Match ( AT2G35530.1 )
(BLAST)

001: MASNEMEKSS KEKEPKTPPP SSTAPPSSQE PSSAVSAGMA TPDWSGFQAY SPMPPPHGYV ASSPQPHPYM WGVQHMMPPY GTPPHPYVAM YPPGGMYAHP
101: SMPPGSYPYS PYAMPSPNGM TEVSGNTTGG TDGDAKQSEV KEKLPIKRSR GSLGSLNMIT GKNNEPGKNS GASANGAYSK SGESASDGSS EGSDGNSQND
201: SGSGLDGKDA EAASENGGSA NGPQNGSAGT PILPVSQTVP IMPMTAAGVP GPPTNLNIGM DYWGAPTSAG IPGMHGKVST PVPGVVAPGS RDGGHSQPWL
301: QDDRELKRQR RKQSNRESAR RSRLRKQAEC DELAQRAEVL NEENTNLRAE INKLKSQCEE LTTENTSLKD QLSLFPPLEG ISMDNDHQEP DTNQTGAAER
401: KVDSYKDST

Arabidopsis Description

BZIP16bZIP transcription factor 16 [Source:UniProtKB/Swiss-Prot;Acc:Q501B2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.