Factsheet for Bra017316.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra004550.1-P
Bra005335.1-P
Bra010572.1-P
Bra011701.1-P
Bra017316.1-P
Bra023012.1-P
Bra023243.1-P
Bra037382.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G35530.1	Bra023243.1-P	AT1G32150.1	18315949
AT2G35530.1	Bra005335.1-P	AT2G35530.1	18315949
AT2G35530.1	Bra017316.1-P	AT2G35530.1	18315949
AT2G35530.1	Bra023012.1-P	AT2G35530.1	18315949
AT2G35530.1	Bra004550.1-P	AT2G46270.1	18315949
AT2G35530.1	Bra037382.1-P	AT4G01120.1	18315949
AT2G35530.1	Bra010572.1-P	AT4G36730.1	18315949
AT2G35530.1	Bra011701.1-P	AT4G36730.1	18315949

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY40465	Canola	nucleus	85.61	75.33
AT2G35530.1	Thale cress	nucleus	68.56	44.25
Bra005335.1-P	Field mustard	nucleus	65.91	41.23
Bra023243.1-P	Field mustard	nucleus	54.55	40.91
Bra023012.1-P	Field mustard	nucleus	57.95	37.97
Solyc08g005290.2.1	Tomato	nucleus	47.35	31.49
VIT_02s0012g02250.t01	Wine grape	nucleus	47.35	30.27
KRH39598	Soybean	nucleus	47.35	30.19
Solyc08g076100.2.1	Tomato	nucleus	46.59	30.07
KRH74331	Soybean	nucleus	46.59	29.64
KRH07569	Soybean	nucleus	45.08	28.61
PGSC0003DMT400047522	Potato	nucleus	40.91	28.05
KRH45342	Soybean	nucleus	43.94	27.82
Zm00001d024041_P002	Maize	nucleus	35.98	27.62
TraesCS5D01G124600.1	Wheat	nucleus	39.02	26.55
TraesCS5B01G122000.2	Wheat	nucleus	39.02	26.55
TraesCS5A01G115300.2	Wheat	nucleus	39.02	26.55
Os12t0233800-02	Rice	nucleus	31.06	26.37
KXG23316	Sorghum	nucleus	37.88	25.97
GSMUA_Achr5P14150_001	Banana	nucleus	39.39	25.87
HORVU5Hr1G029130.19	Barley	nucleus	37.88	25.71
Zm00001d015118_P001	Maize	nucleus	28.03	25.52
GSMUA_Achr4P11610_001	Banana	nucleus	28.79	25.5
GSMUA_Achr4P04530_001	Banana	nucleus	39.39	25.18
Zm00001d041142_P010	Maize	nucleus	36.36	25.13
GSMUA_Achr4P18980_001	Banana	nucleus	37.5	24.57
GSMUA_Achr6P01090_001	Banana	nucleus	37.88	24.21
GSMUA_AchrUn_...	Banana	nucleus	34.09	23.62
EES04440	Sorghum	nucleus	28.41	21.43
TraesCSU01G019200.1	Wheat	nucleus	27.65	21.16
Bra011701.1-P	Field mustard	nucleus	25.0	21.09
TraesCS6A01G087400.2	Wheat	nucleus	27.65	21.04
GSMUA_Achr4P27400_001	Banana	nucleus	32.58	20.92
TraesCS6B01G110100.1	Wheat	nucleus	27.65	20.92
HORVU6Hr1G016240.10	Barley	nucleus	27.65	20.68
Zm00001d039206_P001	Maize	nucleus	16.29	20.67
Os02t0128200-01	Rice	nucleus	26.89	20.46
Zm00001d053967_P001	Maize	nucleus	24.24	20.38
Bra010572.1-P	Field mustard	nucleus	23.11	19.49
Bra004550.1-P	Field mustard	nucleus	18.56	12.93
Bra037382.1-P	Field mustard	nucleus	17.05	12.26

Protein Annotations

EnsemblPlants:Bra017316.1	EnsemblPlants:Bra017316.1-P	EnsemblPlantsGene:Bra017316	GO:GO:0003674	GO:GO:0003700	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR004827
InterPro:bZIP	ncoils:Coil	PANTHER:PTHR22952	PANTHER:PTHR22952:SF47	PFAM:PF00170	PFAM:PF16596
SEG:seg	UniParc:UPI0002543C7E	UniProt:M4DLD5	MapMan:35.1	:	:

Description

AT2G35530 (E=2e-029) | bZIP transcription factor family protein

Coordinates

chrA04:-:15397077..15398548

Molecular Weight (calculated)

28407.5 Da

IEP (calculated)

4.646

GRAVY (calculated)

-0.497

Length

264 amino acids

Sequence
(BLAST)

001: MPPYGTPTHP YVTMYPPRWH VRPSFNPSAN KYLISIEMMW LLIISFNKLL SLCQGSYPYS PYAMPSPNGM TEASGNTTGG TEVEAKQSEM KEKLPIKRSR
101: GGSLGSLNII TGKNSGASAN GAYSKSAMII MICDSDLLFN PLYNSGSGGS ANGPRDGSVG CQTVPVMPMT AAGVPAPPTN LAECDELAQR AEVLNEENAS
201: LREEINKLRS QCEELTSENN SLKDQLLSFP TLEGVAMDKD EQEPPDTNQT GVAETKADSS KDSK

Best Arabidopsis Sequence Match ( AT2G35530.1 )
(BLAST)

001: MASNEMEKSS KEKEPKTPPP SSTAPPSSQE PSSAVSAGMA TPDWSGFQAY SPMPPPHGYV ASSPQPHPYM WGVQHMMPPY GTPPHPYVAM YPPGGMYAHP
101: SMPPGSYPYS PYAMPSPNGM TEVSGNTTGG TDGDAKQSEV KEKLPIKRSR GSLGSLNMIT GKNNEPGKNS GASANGAYSK SGESASDGSS EGSDGNSQND
201: SGSGLDGKDA EAASENGGSA NGPQNGSAGT PILPVSQTVP IMPMTAAGVP GPPTNLNIGM DYWGAPTSAG IPGMHGKVST PVPGVVAPGS RDGGHSQPWL
301: QDDRELKRQR RKQSNRESAR RSRLRKQAEC DELAQRAEVL NEENTNLRAE INKLKSQCEE LTTENTSLKD QLSLFPPLEG ISMDNDHQEP DTNQTGAAER
401: KVDSYKDST

Arabidopsis Description

BZIP16bZIP transcription factor 16 [Source:UniProtKB/Swiss-Prot;Acc:Q501B2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.