Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH74331 | Soybean | nucleus | 95.41 | 95.18 |
| VIT_02s0012g02250.t01 | Wine grape | nucleus | 81.4 | 81.6 |
| KRH45342 | Soybean | nucleus | 81.64 | 81.06 |
| KRH07569 | Soybean | nucleus | 80.19 | 79.81 |
| Solyc08g005290.2.1 | Tomato | nucleus | 70.53 | 73.55 |
| Solyc08g076100.2.1 | Tomato | nucleus | 72.22 | 73.11 |
| PGSC0003DMT400047522 | Potato | nucleus | 62.32 | 67.01 |
| CDY31695 | Canola | nucleus | 59.18 | 62.03 |
| AT1G32150.1 | Thale cress | nucleus | 58.21 | 61.95 |
| AT2G35530.1 | Thale cress | nucleus | 60.63 | 61.37 |
| CDY12261 | Canola | nucleus | 55.07 | 59.84 |
| Bra023243.1-P | Field mustard | nucleus | 50.24 | 59.09 |
| CDY22589 | Canola | nucleus | 54.59 | 59.01 |
| CDY40465 | Canola | nucleus | 42.51 | 58.67 |
| GSMUA_Achr4P04530_001 | Banana | nucleus | 58.21 | 58.35 |
| KXG23316 | Sorghum | nucleus | 54.11 | 58.18 |
| Bra005335.1-P | Field mustard | nucleus | 58.7 | 57.58 |
| GSMUA_Achr5P14150_001 | Banana | nucleus | 55.31 | 56.97 |
| Zm00001d041142_P010 | Maize | nucleus | 52.42 | 56.81 |
| TraesCS5B01G122000.2 | Wheat | nucleus | 53.14 | 56.7 |
| CDY65764 | Canola | nucleus | 54.83 | 56.61 |
| TraesCS5D01G124600.1 | Wheat | nucleus | 52.9 | 56.44 |
| TraesCS5A01G115300.2 | Wheat | nucleus | 52.66 | 56.19 |
| Bra023012.1-P | Field mustard | nucleus | 54.59 | 56.08 |
| GSMUA_Achr4P11610_001 | Banana | nucleus | 40.34 | 56.04 |
| Os02t0128200-01 | Rice | nucleus | 46.86 | 55.91 |
| GSMUA_Achr6P01090_001 | Banana | nucleus | 55.31 | 55.45 |
| Os12t0233800-02 | Rice | nucleus | 41.3 | 54.98 |
| TraesCSU01G019200.1 | Wheat | nucleus | 45.17 | 54.2 |
| EES04440 | Sorghum | nucleus | 45.41 | 53.71 |
| GSMUA_Achr4P18980_001 | Banana | nucleus | 52.17 | 53.6 |
| Zm00001d015118_P001 | Maize | nucleus | 37.44 | 53.45 |
| TraesCS6A01G087400.2 | Wheat | nucleus | 44.69 | 53.31 |
| TraesCS6B01G110100.1 | Wheat | nucleus | 44.93 | 53.3 |
| GSMUA_AchrUn_... | Banana | nucleus | 49.03 | 53.28 |
| CDX84198 | Canola | nucleus | 58.94 | 53.16 |
| Zm00001d039206_P001 | Maize | nucleus | 26.57 | 52.88 |
| HORVU6Hr1G016240.10 | Barley | nucleus | 44.93 | 52.69 |
| Zm00001d053967_P001 | Maize | nucleus | 39.13 | 51.59 |
| GSMUA_Achr4P27400_001 | Banana | nucleus | 49.52 | 49.88 |
| HORVU5Hr1G029130.19 | Barley | nucleus | 45.89 | 48.84 |
| Zm00001d024041_P002 | Maize | nucleus | 40.1 | 48.26 |
| Bra017316.1-P | Field mustard | nucleus | 30.19 | 47.35 |
| CDX84103 | Canola | nucleus, plastid | 37.44 | 44.8 |
| KRH08310 | Soybean | nucleus | 35.51 | 43.49 |
| KRH69948 | Soybean | nucleus | 35.27 | 43.2 |
| CDY32123 | Canola | nucleus | 15.22 | 41.18 |
| KRH76850 | Soybean | nucleus | 31.88 | 37.82 |
| KRH28623 | Soybean | nucleus | 31.88 | 35.77 |
| KRH06537 | Soybean | nucleus | 32.37 | 31.6 |
| KRH47979 | Soybean | nucleus | 31.16 | 30.42 |
| KRH68860 | Soybean | nucleus | 30.68 | 29.88 |
| KRG97109 | Soybean | nucleus | 30.19 | 29.41 |
| KRG89193 | Soybean | nucleus | 17.15 | 23.83 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | EntrezGene:778122 | EMBL:ACUP02005944 | ncoils:Coil | EnsemblPlantsGene:GLYMA_09G208500 |
| GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | UniProt:I1L516 | InterPro:IPR004827 | ProteinID:KRH39597.1 | EnsemblPlants:KRH39598 |
| ProteinID:KRH39598 | ProteinID:KRH39598.1 | InterPro:MFMR | PFAM:PF00170 | PFAM:PF07777 | PFAM:PF16596 |
| ScanProsite:PS00036 | PFscan:PS50217 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF47 | SMART:SM00338 | SUPFAM:SSF57959 |
| UniParc:UPI0001876ACA | InterPro:bZIP | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr9:+:43279318..43291613
Molecular Weight (calculated)
44202.9 Da
IEP (calculated)
6.519
GRAVY (calculated)
-0.959
Length
414 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSSEMDKTT KEKESKTPPP PTSQEQSSTT GTGTINPEWP GFQAYSPIPP HGFLASSPQA HPYMWGVQQF MPPYGTPPHP YVAMYPPGGI YAHPSMPPGS
101: YPFNPFAMPS PNGIAEASGN TPGSMEADGK PSEVKEKLPI KRSKGSLGSL NMITGKNNEH GKTLGTSANG IHSKSGESAS EGEGTSEGSD ANSQNDSQLK
201: SGGRQDSFED EPSQNGSSAY TPQNGGLNIP HTVVNQTMSI IPISAGGAPG AVPGPTTNLN IGMDYWGTPG SSNIPGLGRK VPSTAVAGGM VTVGSRDSAQ
301: SQLWLQDERE LKRQRRKQSN RESARRSRLR KQAECDELAQ RAEALKEENA SLRSEVNRIR SDYEQLLSEN AALKERLGEL PPNDDHHHRS GRNDQHVGND
401: TQQSGQTEAV QGGH
101: YPFNPFAMPS PNGIAEASGN TPGSMEADGK PSEVKEKLPI KRSKGSLGSL NMITGKNNEH GKTLGTSANG IHSKSGESAS EGEGTSEGSD ANSQNDSQLK
201: SGGRQDSFED EPSQNGSSAY TPQNGGLNIP HTVVNQTMSI IPISAGGAPG AVPGPTTNLN IGMDYWGTPG SSNIPGLGRK VPSTAVAGGM VTVGSRDSAQ
301: SQLWLQDERE LKRQRRKQSN RESARRSRLR KQAECDELAQ RAEALKEENA SLRSEVNRIR SDYEQLLSEN AALKERLGEL PPNDDHHHRS GRNDQHVGND
401: TQQSGQTEAV QGGH
001: MASNEMEKSS KEKEPKTPPP SSTAPPSSQE PSSAVSAGMA TPDWSGFQAY SPMPPPHGYV ASSPQPHPYM WGVQHMMPPY GTPPHPYVAM YPPGGMYAHP
101: SMPPGSYPYS PYAMPSPNGM TEVSGNTTGG TDGDAKQSEV KEKLPIKRSR GSLGSLNMIT GKNNEPGKNS GASANGAYSK SGESASDGSS EGSDGNSQND
201: SGSGLDGKDA EAASENGGSA NGPQNGSAGT PILPVSQTVP IMPMTAAGVP GPPTNLNIGM DYWGAPTSAG IPGMHGKVST PVPGVVAPGS RDGGHSQPWL
301: QDDRELKRQR RKQSNRESAR RSRLRKQAEC DELAQRAEVL NEENTNLRAE INKLKSQCEE LTTENTSLKD QLSLFPPLEG ISMDNDHQEP DTNQTGAAER
401: KVDSYKDST
101: SMPPGSYPYS PYAMPSPNGM TEVSGNTTGG TDGDAKQSEV KEKLPIKRSR GSLGSLNMIT GKNNEPGKNS GASANGAYSK SGESASDGSS EGSDGNSQND
201: SGSGLDGKDA EAASENGGSA NGPQNGSAGT PILPVSQTVP IMPMTAAGVP GPPTNLNIGM DYWGAPTSAG IPGMHGKVST PVPGVVAPGS RDGGHSQPWL
301: QDDRELKRQR RKQSNRESAR RSRLRKQAEC DELAQRAEVL NEENTNLRAE INKLKSQCEE LTTENTSLKD QLSLFPPLEG ISMDNDHQEP DTNQTGAAER
401: KVDSYKDST
Arabidopsis Description
BZIP16bZIP transcription factor 16 [Source:UniProtKB/Swiss-Prot;Acc:Q501B2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.