Factsheet for Bra005335.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra004550.1-P
Bra005335.1-P
Bra010572.1-P
Bra011701.1-P
Bra017316.1-P
Bra023012.1-P
Bra023243.1-P
Bra037382.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G35530.1	Bra023243.1-P	AT1G32150.1	18315949
AT2G35530.1	Bra005335.1-P	AT2G35530.1	18315949
AT2G35530.1	Bra017316.1-P	AT2G35530.1	18315949
AT2G35530.1	Bra023012.1-P	AT2G35530.1	18315949
AT2G35530.1	Bra004550.1-P	AT2G46270.1	18315949
AT2G35530.1	Bra037382.1-P	AT4G01120.1	18315949
AT2G35530.1	Bra010572.1-P	AT4G36730.1	18315949
AT2G35530.1	Bra011701.1-P	AT4G36730.1	18315949

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY31695	Canola	nucleus	92.65	98.99
AT2G35530.1	Thale cress	nucleus	81.75	84.35
CDX84198	Canola	nucleus	90.28	83.01
Bra023012.1-P	Field mustard	nucleus	69.91	73.2
Bra023243.1-P	Field mustard	nucleus	56.87	68.18
Bra017316.1-P	Field mustard	nucleus	41.23	65.91
VIT_02s0012g02250.t01	Wine grape	nucleus	59.0	60.29
Solyc08g005290.2.1	Tomato	nucleus	55.92	59.45
KRH39598	Soybean	nucleus	57.58	58.7
KRH74331	Soybean	nucleus	56.87	57.83
Solyc08g076100.2.1	Tomato	nucleus	55.69	57.46
KRH45342	Soybean	nucleus	55.69	56.35
KRH07569	Soybean	nucleus	55.45	56.25
PGSC0003DMT400047522	Potato	nucleus	49.53	54.29
GSMUA_Achr5P14150_001	Banana	nucleus	49.76	52.24
TraesCS5D01G124600.1	Wheat	nucleus	47.87	52.06
TraesCS5A01G115300.2	Wheat	nucleus	47.87	52.06
TraesCS5B01G122000.2	Wheat	nucleus	47.87	52.06
GSMUA_Achr4P04530_001	Banana	nucleus	50.71	51.82
KXG23316	Sorghum	nucleus	46.68	51.17
Zm00001d041142_P010	Maize	nucleus	45.5	50.26
GSMUA_Achr4P11610_001	Banana	nucleus	35.07	49.66
Os12t0233800-02	Rice	nucleus	36.02	48.87
GSMUA_AchrUn_...	Banana	nucleus	44.08	48.82
Zm00001d039206_P001	Maize	nucleus	23.93	48.56
GSMUA_Achr4P18980_001	Banana	nucleus	45.73	47.89
GSMUA_Achr6P01090_001	Banana	nucleus	46.21	47.22
TraesCS6A01G087400.2	Wheat	nucleus	38.15	46.4
TraesCSU01G019200.1	Wheat	nucleus	37.91	46.38
TraesCS6B01G110100.1	Wheat	nucleus	38.15	46.13
Os02t0128200-01	Rice	nucleus	37.91	46.11
EES04440	Sorghum	nucleus	38.15	46.0
Zm00001d015118_P001	Maize	nucleus	31.28	45.52
GSMUA_Achr4P27400_001	Banana	nucleus	44.08	45.26
HORVU6Hr1G016240.10	Barley	nucleus	37.68	45.04
HORVU5Hr1G029130.19	Barley	nucleus	41.23	44.73
Zm00001d053967_P001	Maize	nucleus	31.75	42.68
Zm00001d024041_P002	Maize	nucleus	34.6	42.44
Bra011701.1-P	Field mustard	nucleus	30.81	41.53
Bra010572.1-P	Field mustard	nucleus	29.62	39.94
Bra004550.1-P	Field mustard	nucleus	25.59	28.5
Bra037382.1-P	Field mustard	nucleus	24.41	28.07

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	EnsemblPlantsGene:Bra005335	EnsemblPlants:Bra005335.1	EnsemblPlants:Bra005335.1-P	ncoils:Coil
GO:GO:0003674	GO:GO:0003700	GO:GO:0006139	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	InterPro:IPR004827	UniProt:M4CM97	InterPro:MFMR	PFAM:PF00170
PFAM:PF07777	PFAM:PF16596	ScanProsite:PS00036	PFscan:PS50217	PANTHER:PTHR22952	PANTHER:PTHR22952:SF47
SMART:SM00338	SUPFAM:SSF57959	UniParc:UPI0002547E42	InterPro:bZIP	SEG:seg	:

Description

AT2G35530 (E=3e-149) | bZIP transcription factor family protein

Coordinates

chrA05:+:4901007..4903500

Molecular Weight (calculated)

45354.6 Da

IEP (calculated)

5.158

GRAVY (calculated)

-0.841

Length

422 amino acids

Sequence
(BLAST)

001: MASNEMEKSS KEKEPTTPPP PPPSSQVLFY FYSHDFQLVV ILYCIIDNVM CLQEPSSAVS AGMATPDWSG FQAYSPMPPH GFVASSPQPH PYMWGVQHMN
101: MMPPYGTPPH PYVAMYPPGG MYGHPSMPPG SYPYSPYTMP SPNGMTEASG NTTGGTEGGD AKQSEVKEKL PIKRSRGSLG SLNMITGKNN EPGKNSGASA
201: NGAYSKSGES VSDGSSEGSD ANSQNGSGSG QEGRDENGDS ANAPRNGTPV SQTVPIMPMP AAGPPTNLNI GMEYWGAPTS AAIPGMHGKA SAPVPGVAAP
301: VSRDGGHSQP WLQDDREIKR QKRKQSNRES ARRSRLRKQA ECDELAQRAE LLNEENATLR AEINRLKSQC DELTSENTSL KDQLLSFPSL EGINMDKDDQ
401: EPETYQTGVT ERKADDTYKS ST

Best Arabidopsis Sequence Match ( AT2G35530.1 )
(BLAST)

001: MASNEMEKSS KEKEPKTPPP SSTAPPSSQE PSSAVSAGMA TPDWSGFQAY SPMPPPHGYV ASSPQPHPYM WGVQHMMPPY GTPPHPYVAM YPPGGMYAHP
101: SMPPGSYPYS PYAMPSPNGM TEVSGNTTGG TDGDAKQSEV KEKLPIKRSR GSLGSLNMIT GKNNEPGKNS GASANGAYSK SGESASDGSS EGSDGNSQND
201: SGSGLDGKDA EAASENGGSA NGPQNGSAGT PILPVSQTVP IMPMTAAGVP GPPTNLNIGM DYWGAPTSAG IPGMHGKVST PVPGVVAPGS RDGGHSQPWL
301: QDDRELKRQR RKQSNRESAR RSRLRKQAEC DELAQRAEVL NEENTNLRAE INKLKSQCEE LTTENTSLKD QLSLFPPLEG ISMDNDHQEP DTNQTGAAER
401: KVDSYKDST

Arabidopsis Description

BZIP16bZIP transcription factor 16 [Source:UniProtKB/Swiss-Prot;Acc:Q501B2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.