Factsheet for Os12t0233800-02

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0658900-01
Os02t0128200-01
Os05t0569300-01
Os12t0233800-02

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G32150.1	Os02t0128200-01	AT1G32150.1	18315949
AT1G32150.1	Os12t0233800-02	AT1G32150.1	18315949
AT1G32150.1	Os02t0128200-01	AT2G35530.1	18315949
AT1G32150.1	Os12t0233800-02	AT2G35530.1	18315949
AT1G32150.1	Os01t0658900-01	AT2G46270.1	18315949
AT1G32150.1	Os05t0569300-01	AT2G46270.1	18315949
AT1G32150.1	Os01t0658900-01	AT4G01120.1	18315949
AT1G32150.1	Os05t0569300-01	AT4G01120.1	18315949
AT2G35530.1	Os02t0128200-01	AT1G32150.1	18315949
AT2G35530.1	Os12t0233800-02	AT1G32150.1	18315949
AT2G35530.1	Os02t0128200-01	AT2G35530.1	18315949
AT2G35530.1	Os12t0233800-02	AT2G35530.1	18315949
AT2G35530.1	Os01t0658900-01	AT2G46270.1	18315949
AT2G35530.1	Os05t0569300-01	AT2G46270.1	18315949
AT2G35530.1	Os01t0658900-01	AT4G01120.1	18315949
AT2G35530.1	Os05t0569300-01	AT4G01120.1	18315949

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG23316	Sorghum	nucleus	79.74	64.42
TraesCS5D01G124600.1	Wheat	nucleus	77.49	62.11
TraesCS5B01G122000.2	Wheat	nucleus	77.49	62.11
TraesCS5A01G115300.2	Wheat	nucleus	77.17	61.86
Zm00001d041142_P010	Maize	nucleus	74.92	60.99
Zm00001d024041_P002	Maize	nucleus	60.77	54.94
HORVU5Hr1G029130.19	Barley	nucleus	64.95	51.93
GSMUA_Achr4P04530_001	Banana	nucleus	58.84	44.31
Solyc08g076100.2.1	Tomato	nucleus	56.27	42.79
VIT_02s0012g02250.t01	Wine grape	nucleus	56.27	42.37
Os02t0128200-01	Rice	nucleus	47.27	42.36
GSMUA_Achr5P14150_001	Banana	nucleus	53.7	41.54
KRH39598	Soybean	nucleus	54.98	41.3
Solyc08g005290.2.1	Tomato	nucleus	52.09	40.81
KRH74331	Soybean	nucleus	54.34	40.72
GSMUA_AchrUn_...	Banana	nucleus	49.52	40.42
AT1G32150.1	Thale cress	nucleus	50.48	40.36
KRH45342	Soybean	nucleus	53.7	40.05
GSMUA_Achr4P18980_001	Banana	nucleus	51.45	39.7
KRH07569	Soybean	nucleus	53.05	39.66
CDY12261	Canola	nucleus	48.23	39.37
GSMUA_Achr6P01090_001	Banana	nucleus	52.09	39.23
AT2G35530.1	Thale cress	nucleus	51.13	38.88
CDY31695	Canola	nucleus	49.2	38.73
CDY22589	Canola	nucleus	47.59	38.64
GSMUA_Achr4P27400_001	Banana	nucleus	50.8	38.44
Bra023243.1-P	Field mustard	nucleus	43.41	38.35
GSMUA_Achr4P11610_001	Banana	nucleus	35.05	36.58
Bra005335.1-P	Field mustard	nucleus	48.87	36.02
PGSC0003DMT400047522	Potato	nucleus	44.37	35.84
CDY65764	Canola	nucleus	45.66	35.41
Bra023012.1-P	Field mustard	nucleus	45.34	34.99
CDX84103	Canola	nucleus, plastid	38.91	34.97
CDX84198	Canola	nucleus	49.84	33.77
CDY40465	Canola	nucleus	32.48	33.67
Bra017316.1-P	Field mustard	nucleus	26.37	31.06
Os03t0239400-01	Rice	nucleus	37.62	30.55
Os07t0209800-01	Rice	nucleus	25.08	20.1
Os05t0569300-01	Rice	nucleus	22.83	18.68
Os01t0658900-01	Rice	nucleus	19.61	16.94
CDY32123	Canola	nucleus	2.89	5.88
Os03t0809200-01	Rice	cytosol, nucleus	0.96	3.06

Protein Annotations

MapMan:35.1	ProteinID:ABA96884.1	EMBL:AK065767	EMBL:AK121360	ProteinID:BAT16455.1	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:MFMR	EnsemblPlantsGene:Os12g0233800
EnsemblPlants:Os12t0233800-02	PFAM:PF07777	PFAM:PF16596	PANTHER:PTHR22952	PANTHER:PTHR22952:SF47	UniProt:Q2QVD6
UniParc:UPI0000681728	SEG:seg	:	:	:	:

Description

BASIC/LEUCINE ZIPPER FACTOR 1ASimilar to DNA-binding factor of bZIP class. (Os12t0233800-01);Similar to DNA-binding factor of bZIP class. (Os12t0233800-02);Similar to DNA-binding factor of bZIP class. (Os12t0233800-03)

Coordinates

chr12:-:7330157..7338043

Molecular Weight (calculated)

31872.6 Da

IEP (calculated)

6.074

GRAVY (calculated)

-0.629

Length

311 amino acids

Sequence
(BLAST)

001: MGSSGADAPT KTSKASAPQE QQPPASSSTA TPAVYPDWAN FQGYPPIPPH GFFPSPVASS PQGHPYMWGA QPMIPPYGTP PPPYVMYPPG VYAHPSMPPG
101: AHPFTPYAMA SPNGNADPTG TTTTAAAAAA GETDGKSSEG KEKSPIKRSK GSLGSLNMIT GKNSTEHGKT SGASANGAIS QSGESGSESS SEGSEANSQN
201: DSHHKESGQE QDGEVRSSQN GVSRSPSQAK LNQTMAIMPM TSSGPVPAPT TNLNIGMDYW ANTASSTPAI HGKATPTAAP GSMVPGEQWV QVCSISPSLQ
301: EPCTCNIFFP L

Best Arabidopsis Sequence Match ( AT1G32150.1 )
(BLAST)

001: MGSSEMEKSG KEKEPKTTPP STSSSAPATV VSQEPSSAVS AGVAVTQDWS GFQAYSPMPP HGYVASSPQP HPYMWGVQHM MPPYGTPPHP YVTMYPPGGM
101: YAHPSLPPGS YPYSPYAMPS PNGMAEASGN TGSVIEGDGK PSDGKEKLPI KRSKGSLGSL NMIIGKNNEA GKNSGASANG ACSKSAESGS DGSSDGSDAN
201: SQNDSGSRHN GKDGETASES GGSAHGPPRN GSNLPVNQTV AIMPVSATGV PGPPTNLNIG MDYWSGHGNV SGAVPGVVVD GSQSQPWLQV SDEREIKRQR
301: RKQSNRESAR RSRLRKQAEC DELAQRAEVL NGENSSLRAE INKLKSQYEE LLAENSSLKN KFSSAPSLEG GDLDKNEQEP QRSTRQDVA

Arabidopsis Description

BZIP68bZIP transcription factor 68 [Source:UniProtKB/Swiss-Prot;Acc:Q84LG2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.