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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 6
  • mitochondrion 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH39598 Soybean nucleus 81.6 81.4
KRH74331 Soybean nucleus 80.63 80.24
Solyc08g005290.2.1 Tomato nucleus 74.09 77.08
KRH45342 Soybean nucleus 76.76 76.02
KRH07569 Soybean nucleus 76.27 75.72
Solyc08g076100.2.1 Tomato nucleus 74.58 75.31
PGSC0003DMT400047522 Potato nucleus 64.89 69.61
AT1G32150.1 Thale cress nucleus 60.05 63.75
CDY31695 Canola nucleus 60.77 63.54
AT2G35530.1 Thale cress nucleus 62.23 62.84
CDY12261 Canola nucleus 55.45 60.1
GSMUA_Achr5P14150_001 Banana nucleus 58.11 59.7
Bra023243.1-P Field mustard nucleus 50.61 59.38
CDY40465 Canola nucleus 43.1 59.33
KXG23316 Sorghum nucleus 55.21 59.22
CDY22589 Canola nucleus 54.72 59.01
Bra005335.1-P Field mustard nucleus 60.29 59.0
GSMUA_Achr4P04530_001 Banana nucleus 58.84 58.84
CDY65764 Canola nucleus 56.66 58.35
Zm00001d041142_P010 Maize nucleus 53.75 58.12
Bra023012.1-P Field mustard nucleus 56.42 57.82
GSMUA_Achr4P11610_001 Banana nucleus 41.65 57.72
GSMUA_Achr6P01090_001 Banana nucleus 57.63 57.63
TraesCS5B01G122000.2 Wheat nucleus 53.75 57.22
TraesCS5D01G124600.1 Wheat nucleus 53.51 56.96
TraesCS5A01G115300.2 Wheat nucleus 53.27 56.7
GSMUA_Achr4P18980_001 Banana nucleus 55.21 56.58
Os02t0128200-01 Rice nucleus 47.46 56.48
Os12t0233800-02 Rice nucleus 42.37 56.27
TraesCSU01G019200.1 Wheat nucleus 46.97 56.23
GSMUA_AchrUn_... Banana nucleus 51.82 56.17
TraesCS6B01G110100.1 Wheat nucleus 46.73 55.3
Zm00001d015118_P001 Maize nucleus 38.74 55.17
TraesCS6A01G087400.2 Wheat nucleus 46.25 55.04
EES04440 Sorghum nucleus 46.49 54.86
HORVU6Hr1G016240.10 Barley nucleus 46.25 54.11
CDX84198 Canola nucleus 60.05 54.03
GSMUA_Achr4P27400_001 Banana nucleus 53.51 53.77
Zm00001d039206_P001 Maize nucleus 26.63 52.88
Zm00001d053967_P001 Maize nucleus 40.19 52.87
Zm00001d024041_P002 Maize nucleus 41.89 50.29
HORVU5Hr1G029130.19 Barley nucleus 46.0 48.84
Bra017316.1-P Field mustard nucleus 30.27 47.35
CDX84103 Canola nucleus, plastid 37.77 45.09
VIT_04s0023g01360.t01 Wine grape nucleus 37.77 42.86
CDY32123 Canola nucleus 14.77 39.87
VIT_18s0001g12120.t01 Wine grape nucleus 35.11 36.43
VIT_15s0046g01440.t01 Wine grape nucleus 32.45 31.16
VIT_02s0025g01020.t01 Wine grape nucleus 26.39 27.39
Protein Annotations
Gene3D:1.20.5.170EntrezGene:100243644wikigene:100243644MapMan:15.5.4.1EMBL:AM476394ProteinID:CAN81625
ProteinID:CAN81625.1ProteinID:CBI33817ProteinID:CBI33817.3ncoils:CoilUniProt:D7TTQ2EMBL:FN596247
GO:GO:0003674GO:GO:0003700GO:GO:0006139GO:GO:0006355GO:GO:0008150GO:GO:0008152
GO:GO:0009058GO:GO:0009987InterPro:IPR004827EntrezGene:LOC100243644wikigene:LOC100243644InterPro:MFMR
PFAM:PF00170PFAM:PF07777PFAM:PF16596ScanProsite:PS00036PFscan:PS50217PANTHER:PTHR22952
PANTHER:PTHR22952:SF47SMART:SM00338SUPFAM:SSF57959TIGR:TC52987UniParc:UPI00015C8B0FArrayExpress:VIT_02s0012g02250
EnsemblPlantsGene:VIT_02s0012g02250EnsemblPlants:VIT_02s0012g02250.t01unigene:Vvi.2990RefSeq:XP_002276625RefSeq:XP_002276625.1RefSeq:XP_010663002.1
RefSeq:XP_010663003.1InterPro:bZIPSEG:seg:::
Description
No Description!
Coordinates
chr2:-:9137736..9153313
Molecular Weight (calculated)
43668.4 Da
IEP (calculated)
6.917
GRAVY (calculated)
-0.898
Length
413 amino acids
Sequence
(BLAST)
001: MGSSEMDKAG KEKESKTPPT TTQEQSSTTS AGTVNPDWSG FQAYSPIPPH GFLASSPQAH PYMWGVQHLM PPYGTPPHPY VAMYPPGGLY AHPSIPPGSY
101: PFSPFAMPSP NGIAETSGTT PGSMEADGKS SEGKEKLPIK RSKGSLGSLN MLTGKNNELG KTSGASANGV YSKSAESASE GSSEGSDANS QSDSQLKSGC
201: RQDSLEAETS QNGSTCHAPQ NGGPNTPHAM VNQTMAIMPI SAPGAPGGVP GPTTNLNIGM DYWGAPTSST IPAMRGKVPS APVTGGIVTA GSRDSVQSQL
301: WLQDERELKR QRRKQSNRES ARRSRLRKQA ECDELAQRAD ALKEENASLR AEVSRIKSEY EQLLSENASL KERLGEIPGQ DDHRTGGRNE QHLGNDTKQT
401: GQTGQAEHGQ GGH
Best Arabidopsis Sequence Match ( AT2G35530.1 )
(BLAST)
001: MASNEMEKSS KEKEPKTPPP SSTAPPSSQE PSSAVSAGMA TPDWSGFQAY SPMPPPHGYV ASSPQPHPYM WGVQHMMPPY GTPPHPYVAM YPPGGMYAHP
101: SMPPGSYPYS PYAMPSPNGM TEVSGNTTGG TDGDAKQSEV KEKLPIKRSR GSLGSLNMIT GKNNEPGKNS GASANGAYSK SGESASDGSS EGSDGNSQND
201: SGSGLDGKDA EAASENGGSA NGPQNGSAGT PILPVSQTVP IMPMTAAGVP GPPTNLNIGM DYWGAPTSAG IPGMHGKVST PVPGVVAPGS RDGGHSQPWL
301: QDDRELKRQR RKQSNRESAR RSRLRKQAEC DELAQRAEVL NEENTNLRAE INKLKSQCEE LTTENTSLKD QLSLFPPLEG ISMDNDHQEP DTNQTGAAER
401: KVDSYKDST
Arabidopsis Description
BZIP16bZIP transcription factor 16 [Source:UniProtKB/Swiss-Prot;Acc:Q501B2]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.