Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH39598 | Soybean | nucleus | 81.6 | 81.4 |
KRH74331 | Soybean | nucleus | 80.63 | 80.24 |
Solyc08g005290.2.1 | Tomato | nucleus | 74.09 | 77.08 |
KRH45342 | Soybean | nucleus | 76.76 | 76.02 |
KRH07569 | Soybean | nucleus | 76.27 | 75.72 |
Solyc08g076100.2.1 | Tomato | nucleus | 74.58 | 75.31 |
PGSC0003DMT400047522 | Potato | nucleus | 64.89 | 69.61 |
AT1G32150.1 | Thale cress | nucleus | 60.05 | 63.75 |
CDY31695 | Canola | nucleus | 60.77 | 63.54 |
AT2G35530.1 | Thale cress | nucleus | 62.23 | 62.84 |
CDY12261 | Canola | nucleus | 55.45 | 60.1 |
GSMUA_Achr5P14150_001 | Banana | nucleus | 58.11 | 59.7 |
Bra023243.1-P | Field mustard | nucleus | 50.61 | 59.38 |
CDY40465 | Canola | nucleus | 43.1 | 59.33 |
KXG23316 | Sorghum | nucleus | 55.21 | 59.22 |
CDY22589 | Canola | nucleus | 54.72 | 59.01 |
Bra005335.1-P | Field mustard | nucleus | 60.29 | 59.0 |
GSMUA_Achr4P04530_001 | Banana | nucleus | 58.84 | 58.84 |
CDY65764 | Canola | nucleus | 56.66 | 58.35 |
Zm00001d041142_P010 | Maize | nucleus | 53.75 | 58.12 |
Bra023012.1-P | Field mustard | nucleus | 56.42 | 57.82 |
GSMUA_Achr4P11610_001 | Banana | nucleus | 41.65 | 57.72 |
GSMUA_Achr6P01090_001 | Banana | nucleus | 57.63 | 57.63 |
TraesCS5B01G122000.2 | Wheat | nucleus | 53.75 | 57.22 |
TraesCS5D01G124600.1 | Wheat | nucleus | 53.51 | 56.96 |
TraesCS5A01G115300.2 | Wheat | nucleus | 53.27 | 56.7 |
GSMUA_Achr4P18980_001 | Banana | nucleus | 55.21 | 56.58 |
Os02t0128200-01 | Rice | nucleus | 47.46 | 56.48 |
Os12t0233800-02 | Rice | nucleus | 42.37 | 56.27 |
TraesCSU01G019200.1 | Wheat | nucleus | 46.97 | 56.23 |
GSMUA_AchrUn_... | Banana | nucleus | 51.82 | 56.17 |
TraesCS6B01G110100.1 | Wheat | nucleus | 46.73 | 55.3 |
Zm00001d015118_P001 | Maize | nucleus | 38.74 | 55.17 |
TraesCS6A01G087400.2 | Wheat | nucleus | 46.25 | 55.04 |
EES04440 | Sorghum | nucleus | 46.49 | 54.86 |
HORVU6Hr1G016240.10 | Barley | nucleus | 46.25 | 54.11 |
CDX84198 | Canola | nucleus | 60.05 | 54.03 |
GSMUA_Achr4P27400_001 | Banana | nucleus | 53.51 | 53.77 |
Zm00001d039206_P001 | Maize | nucleus | 26.63 | 52.88 |
Zm00001d053967_P001 | Maize | nucleus | 40.19 | 52.87 |
Zm00001d024041_P002 | Maize | nucleus | 41.89 | 50.29 |
HORVU5Hr1G029130.19 | Barley | nucleus | 46.0 | 48.84 |
Bra017316.1-P | Field mustard | nucleus | 30.27 | 47.35 |
CDX84103 | Canola | nucleus, plastid | 37.77 | 45.09 |
VIT_04s0023g01360.t01 | Wine grape | nucleus | 37.77 | 42.86 |
CDY32123 | Canola | nucleus | 14.77 | 39.87 |
VIT_18s0001g12120.t01 | Wine grape | nucleus | 35.11 | 36.43 |
VIT_15s0046g01440.t01 | Wine grape | nucleus | 32.45 | 31.16 |
VIT_02s0025g01020.t01 | Wine grape | nucleus | 26.39 | 27.39 |
Protein Annotations
Gene3D:1.20.5.170 | EntrezGene:100243644 | wikigene:100243644 | MapMan:15.5.4.1 | EMBL:AM476394 | ProteinID:CAN81625 |
ProteinID:CAN81625.1 | ProteinID:CBI33817 | ProteinID:CBI33817.3 | ncoils:Coil | UniProt:D7TTQ2 | EMBL:FN596247 |
GO:GO:0003674 | GO:GO:0003700 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
GO:GO:0009058 | GO:GO:0009987 | InterPro:IPR004827 | EntrezGene:LOC100243644 | wikigene:LOC100243644 | InterPro:MFMR |
PFAM:PF00170 | PFAM:PF07777 | PFAM:PF16596 | ScanProsite:PS00036 | PFscan:PS50217 | PANTHER:PTHR22952 |
PANTHER:PTHR22952:SF47 | SMART:SM00338 | SUPFAM:SSF57959 | TIGR:TC52987 | UniParc:UPI00015C8B0F | ArrayExpress:VIT_02s0012g02250 |
EnsemblPlantsGene:VIT_02s0012g02250 | EnsemblPlants:VIT_02s0012g02250.t01 | unigene:Vvi.2990 | RefSeq:XP_002276625 | RefSeq:XP_002276625.1 | RefSeq:XP_010663002.1 |
RefSeq:XP_010663003.1 | InterPro:bZIP | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr2:-:9137736..9153313
Molecular Weight (calculated)
43668.4 Da
IEP (calculated)
6.917
GRAVY (calculated)
-0.898
Length
413 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSSEMDKAG KEKESKTPPT TTQEQSSTTS AGTVNPDWSG FQAYSPIPPH GFLASSPQAH PYMWGVQHLM PPYGTPPHPY VAMYPPGGLY AHPSIPPGSY
101: PFSPFAMPSP NGIAETSGTT PGSMEADGKS SEGKEKLPIK RSKGSLGSLN MLTGKNNELG KTSGASANGV YSKSAESASE GSSEGSDANS QSDSQLKSGC
201: RQDSLEAETS QNGSTCHAPQ NGGPNTPHAM VNQTMAIMPI SAPGAPGGVP GPTTNLNIGM DYWGAPTSST IPAMRGKVPS APVTGGIVTA GSRDSVQSQL
301: WLQDERELKR QRRKQSNRES ARRSRLRKQA ECDELAQRAD ALKEENASLR AEVSRIKSEY EQLLSENASL KERLGEIPGQ DDHRTGGRNE QHLGNDTKQT
401: GQTGQAEHGQ GGH
101: PFSPFAMPSP NGIAETSGTT PGSMEADGKS SEGKEKLPIK RSKGSLGSLN MLTGKNNELG KTSGASANGV YSKSAESASE GSSEGSDANS QSDSQLKSGC
201: RQDSLEAETS QNGSTCHAPQ NGGPNTPHAM VNQTMAIMPI SAPGAPGGVP GPTTNLNIGM DYWGAPTSST IPAMRGKVPS APVTGGIVTA GSRDSVQSQL
301: WLQDERELKR QRRKQSNRES ARRSRLRKQA ECDELAQRAD ALKEENASLR AEVSRIKSEY EQLLSENASL KERLGEIPGQ DDHRTGGRNE QHLGNDTKQT
401: GQTGQAEHGQ GGH
001: MASNEMEKSS KEKEPKTPPP SSTAPPSSQE PSSAVSAGMA TPDWSGFQAY SPMPPPHGYV ASSPQPHPYM WGVQHMMPPY GTPPHPYVAM YPPGGMYAHP
101: SMPPGSYPYS PYAMPSPNGM TEVSGNTTGG TDGDAKQSEV KEKLPIKRSR GSLGSLNMIT GKNNEPGKNS GASANGAYSK SGESASDGSS EGSDGNSQND
201: SGSGLDGKDA EAASENGGSA NGPQNGSAGT PILPVSQTVP IMPMTAAGVP GPPTNLNIGM DYWGAPTSAG IPGMHGKVST PVPGVVAPGS RDGGHSQPWL
301: QDDRELKRQR RKQSNRESAR RSRLRKQAEC DELAQRAEVL NEENTNLRAE INKLKSQCEE LTTENTSLKD QLSLFPPLEG ISMDNDHQEP DTNQTGAAER
401: KVDSYKDST
101: SMPPGSYPYS PYAMPSPNGM TEVSGNTTGG TDGDAKQSEV KEKLPIKRSR GSLGSLNMIT GKNNEPGKNS GASANGAYSK SGESASDGSS EGSDGNSQND
201: SGSGLDGKDA EAASENGGSA NGPQNGSAGT PILPVSQTVP IMPMTAAGVP GPPTNLNIGM DYWGAPTSAG IPGMHGKVST PVPGVVAPGS RDGGHSQPWL
301: QDDRELKRQR RKQSNRESAR RSRLRKQAEC DELAQRAEVL NEENTNLRAE INKLKSQCEE LTTENTSLKD QLSLFPPLEG ISMDNDHQEP DTNQTGAAER
401: KVDSYKDST
Arabidopsis Description
BZIP16bZIP transcription factor 16 [Source:UniProtKB/Swiss-Prot;Acc:Q501B2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.