Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- plastid 1
- extracellular 2
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 1
- golgi 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G269600.2 | Wheat | nucleus | 73.78 | 64.02 |
| TraesCS2D01G236200.3 | Wheat | nucleus | 73.78 | 63.85 |
| TraesCS2A01G245700.2 | Wheat | nucleus | 73.17 | 63.49 |
| Os07t0209800-01 | Rice | nucleus | 64.02 | 54.12 |
| Zm00001d005244_P002 | Maize | nucleus | 60.67 | 52.37 |
| Zm00001d019166_P002 | Maize | nucleus | 56.71 | 47.94 |
| OQU88693 | Sorghum | nucleus | 66.77 | 33.18 |
| HORVU0Hr1G013950.21 | Barley | nucleus | 32.62 | 30.48 |
| GSMUA_Achr6P00170_001 | Banana | nucleus | 24.39 | 21.33 |
| GSMUA_Achr4P33130_001 | Banana | nucleus | 22.87 | 20.38 |
| HORVU6Hr1G016240.10 | Barley | nucleus | 19.82 | 18.41 |
| HORVU5Hr1G029130.19 | Barley | nucleus | 18.6 | 15.68 |
| HORVU4Hr1G064120.18 | Barley | nucleus | 18.9 | 15.35 |
| HORVU1Hr1G090030.11 | Barley | nucleus, plastid | 17.99 | 12.91 |
| HORVU1Hr1G089970.10 | Barley | cytosol | 12.5 | 11.08 |
| HORVU2Hr1G055230.2 | Barley | nucleus | 2.44 | 5.8 |
| GSMUA_Achr9P09280_001 | Banana | nucleus | 0.3 | 1.08 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G055160.2 | EnsemblPlantsGene:HORVU2Hr1G055160 | PANTHER:PTHR22952 | PANTHER:PTHR22952:SF125 | PFAM:PF16596 | SEG:seg |
| SignalP:SignalP-noTM | UniParc:UPI000B476D3A | UniProt:A0A287I1Q1 | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chrchr2H:-:342000318..342006020
Molecular Weight (calculated)
33755.6 Da
IEP (calculated)
7.250
GRAVY (calculated)
-0.224
Length
328 amino acids
Sequence
(BLAST)
(BLAST)
001: PKPSLFALPL LFPPVRLLLP HTAQVAPPPV ARYTHLLRRF LPSRAGEVQK HPRSLPRERM ASSSDEQPKP PEPPAAAVAV ATAAPQSHAE WAASMQAFYA
101: SAGHPYAAWP AQHLMAAAAA ASGSPYGAPV PFPMYHPGAA MAYYAHASMA AGVPYPTAEA VAAAAAAAPI VAEGKGKAGG GVSPEKGSSA APSGDDASQS
201: CESGSDESSD TRDYDTDQKD SSAPKKRKSG NSSAEGEPSQ AAAVPYAVVE SPYQLKGRSA SKLPVSAPGR AALPNATPNL NIGIDLWSAS QSLAMIPVQG
301: EANPGLALAR CDGVGQLVWI FLSCFYDN
101: SAGHPYAAWP AQHLMAAAAA ASGSPYGAPV PFPMYHPGAA MAYYAHASMA AGVPYPTAEA VAAAAAAAPI VAEGKGKAGG GVSPEKGSSA APSGDDASQS
201: CESGSDESSD TRDYDTDQKD SSAPKKRKSG NSSAEGEPSQ AAAVPYAVVE SPYQLKGRSA SKLPVSAPGR AALPNATPNL NIGIDLWSAS QSLAMIPVQG
301: EANPGLALAR CDGVGQLVWI FLSCFYDN
001: MGTSEDKMPF KTTKPTSSAQ EVPPTPYPDW QNSMQAYYGG GGTPNPFFPS PVGSPSPHPY MWGAQHHMMP PYGTPVPYPA MYPPGAVYAH PSMPMPPNSG
101: PTNKEPAKDQ ASGKKSKGNS KKKAEGGDKA LSGSGNDGAS HSDESVTAGS SDENDENANQ QEQGSIRKPS FGQMLADASS QSTTGEIQGS VPMKPVAPGT
201: NLNIGMDLWS SQAGVPVKDE RELKRQKRKQ SNRESARRSR LRKQAECEQL QQRVESLSNE NQSLRDELQR LSSECDKLKS ENNSIQDELQ RVLGAEAVAN
301: LEQNAAGSKD GEGTN
101: PTNKEPAKDQ ASGKKSKGNS KKKAEGGDKA LSGSGNDGAS HSDESVTAGS SDENDENANQ QEQGSIRKPS FGQMLADASS QSTTGEIQGS VPMKPVAPGT
201: NLNIGMDLWS SQAGVPVKDE RELKRQKRKQ SNRESARRSR LRKQAECEQL QQRVESLSNE NQSLRDELQR LSSECDKLKS ENNSIQDELQ RVLGAEAVAN
301: LEQNAAGSKD GEGTN
Arabidopsis Description
GBF1Z-box binding factor 2 protein [Source:UniProtKB/TrEMBL;Acc:Q5K1L6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.