Factsheet for GSMUA_Achr9P09280_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G055230.2	Barley	nucleus	36.56	24.64
Zm00001d024285_P001	Maize	nucleus	33.33	14.55
Os03t0809200-01	Rice	cytosol, nucleus	13.98	13.27
OQU90776	Sorghum	nucleus, plastid	36.56	11.18
GSMUA_Achr4P33130_001	Banana	nucleus	44.09	11.14
GSMUA_Achr6P00170_001	Banana	nucleus	43.01	10.67
GSMUA_Achr4P11610_001	Banana	nucleus	33.33	10.4
Os07t0209800-01	Rice	nucleus	39.78	9.54
TraesCS2B01G269600.2	Wheat	nucleus	38.71	9.52
Zm00001d005244_P002	Maize	nucleus	38.71	9.47
TraesCS5D01G473000.1	Wheat	nucleus	36.56	9.39
Zm00001d019166_P002	Maize	nucleus	38.71	9.28
Zm00001d034571_P001	Maize	nucleus	35.48	9.27
TraesCS5A01G460800.2	Wheat	nucleus	35.48	9.27
TraesCS2A01G245700.2	Wheat	nucleus	37.63	9.26
TraesCS2D01G236200.3	Wheat	nucleus	37.63	9.23
TraesCS5B01G470600.1	Wheat	nucleus	34.41	8.96
HORVU0Hr1G013950.21	Barley	nucleus	33.33	8.83
GSMUA_Achr4P18980_001	Banana	nucleus	35.48	8.19
GSMUA_Achr6P01090_001	Banana	nucleus	34.41	7.75
GSMUA_Achr5P14150_001	Banana	nucleus	33.33	7.71
GSMUA_Achr9P05310_001	Banana	nucleus	34.41	7.69
GSMUA_Achr4P27400_001	Banana	nucleus	33.33	7.54
GSMUA_Achr4P04530_001	Banana	nucleus	33.33	7.51
GSMUA_Achr1P05050_001	Banana	nucleus	33.33	7.28
GSMUA_Achr6P32000_001	Banana	nucleus	29.03	7.16
GSMUA_AchrUn_...	Banana	nucleus	29.03	7.09
OQU88693	Sorghum	nucleus	39.78	5.61
TraesCS3B01G545800.1	Wheat	nucleus	1.08	0.43
HORVU2Hr1G055160.2	Barley	extracellular, mitochondrion, plastid, vacuole	1.08	0.3

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	ncoils:Coil	GO:GO:0003674	GO:GO:0003700	GO:GO:0006139
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr9G09280_001
EnsemblPlants:GSMUA_Achr9P09280_001	EnsemblPlants:GSMUA_Achr9T09280_001	InterPro:IPR004827	UniProt:M0TYT7	PFAM:PF00170	ScanProsite:PS00036
PFscan:PS50217	PANTHER:PTHR22952	PANTHER:PTHR22952:SF125	SMART:SM00338	SUPFAM:SSF57959	UniParc:UPI000296B581
InterPro:bZIP	SEG:seg	:	:	:	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr9G09280_001]

Coordinates

chr9:-:6003756..6008345

Molecular Weight (calculated)

10923.2 Da

IEP (calculated)

9.686

GRAVY (calculated)

-0.849

Length

93 amino acids

Sequence
(BLAST)

1: MEGLLDDDEF RERRKQANRE SARRSRIRKR QEYEDSARMM AVLKNENDVL KAKNEILMKR IKDLEAGSIR IMEILSGLYW PADTLDALGI RPS

Best Arabidopsis Sequence Match ( AT2G35530.1 )
(BLAST)

001: MASNEMEKSS KEKEPKTPPP SSTAPPSSQE PSSAVSAGMA TPDWSGFQAY SPMPPPHGYV ASSPQPHPYM WGVQHMMPPY GTPPHPYVAM YPPGGMYAHP
101: SMPPGSYPYS PYAMPSPNGM TEVSGNTTGG TDGDAKQSEV KEKLPIKRSR GSLGSLNMIT GKNNEPGKNS GASANGAYSK SGESASDGSS EGSDGNSQND
201: SGSGLDGKDA EAASENGGSA NGPQNGSAGT PILPVSQTVP IMPMTAAGVP GPPTNLNIGM DYWGAPTSAG IPGMHGKVST PVPGVVAPGS RDGGHSQPWL
301: QDDRELKRQR RKQSNRESAR RSRLRKQAEC DELAQRAEVL NEENTNLRAE INKLKSQCEE LTTENTSLKD QLSLFPPLEG ISMDNDHQEP DTNQTGAAER
401: KVDSYKDST

Arabidopsis Description

BZIP16bZIP transcription factor 16 [Source:UniProtKB/Swiss-Prot;Acc:Q501B2]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.