Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra004550.1-P | Field mustard | nucleus | 84.29 | 84.96 |
| CDX95685 | Canola | nucleus | 64.66 | 82.33 |
| CDY42029 | Canola | nucleus | 83.51 | 77.05 |
| CDX80004 | Canola | golgi | 84.56 | 72.91 |
| KRG97109 | Soybean | nucleus | 57.85 | 52.0 |
| KRH68860 | Soybean | nucleus | 57.33 | 51.53 |
| VIT_15s0046g01440.t01 | Wine grape | nucleus | 57.59 | 51.16 |
| AT4G01120.1 | Thale cress | nucleus | 48.17 | 51.11 |
| PGSC0003DMT400000266 | Potato | nucleus | 53.66 | 49.16 |
| KRH06537 | Soybean | nucleus | 54.45 | 49.06 |
| KRH47979 | Soybean | nucleus | 53.93 | 48.58 |
| Solyc01g095460.2.1 | Tomato | nucleus | 52.88 | 48.33 |
| PGSC0003DMT400084203 | Potato | nucleus | 48.69 | 45.04 |
| Solyc05g050220.2.1 | Tomato | nucleus | 47.12 | 43.27 |
| GSMUA_Achr6P32000_001 | Banana | nucleus | 39.79 | 40.32 |
| TraesCS1A01G409800.2 | Wheat | nucleus | 37.7 | 37.7 |
| Os05t0569300-01 | Rice | nucleus | 37.43 | 37.63 |
| GSMUA_Achr1P05050_001 | Banana | nucleus | 41.88 | 37.56 |
| GSMUA_Achr9P05310_001 | Banana | nucleus | 40.31 | 37.02 |
| Os01t0658900-01 | Rice | nucleus | 34.82 | 36.94 |
| Zm00001d039065_P006 | Maize | nucleus | 36.13 | 36.6 |
| TraesCS1D01G417100.1 | Wheat | nucleus | 37.43 | 35.57 |
| Zm00001d043992_P001 | Maize | nucleus | 35.08 | 35.54 |
| EES18712 | Sorghum | nucleus | 35.34 | 35.34 |
| TraesCS1B01G439800.1 | Wheat | nucleus | 36.91 | 34.99 |
| AT4G36730.1 | Thale cress | nucleus | 28.27 | 34.29 |
| Zm00001d040500_P001 | Maize | nucleus | 15.97 | 31.44 |
| Zm00001d025638_P001 | Maize | nucleus | 15.71 | 31.41 |
| Zm00001d043908_P001 | Maize | nucleus | 15.71 | 31.41 |
| HORVU1Hr1G090030.11 | Barley | nucleus, plastid | 37.17 | 31.07 |
| AT1G32150.1 | Thale cress | nucleus | 29.06 | 28.53 |
| AT2G35530.1 | Thale cress | nucleus | 29.06 | 27.14 |
| KXG33037 | Sorghum | nucleus | 34.82 | 26.81 |
| HORVU1Hr1G089970.10 | Barley | cytosol | 23.04 | 23.78 |
Protein Annotations
| Gene3D:1.20.5.170 | MapMan:15.5.4.1 | EntrezGene:819235 | ProteinID:AAC62879.1 | ProteinID:AEC10667.1 | ProteinID:AEC10668.1 |
| EMBL:AF370307 | ProteinID:ANM61226.1 | ProteinID:ANM61227.1 | ArrayExpress:AT2G46270 | EnsemblPlantsGene:AT2G46270 | RefSeq:AT2G46270 |
| TAIR:AT2G46270 | RefSeq:AT2G46270-TAIR-G | EnsemblPlants:AT2G46270.1 | TAIR:AT2G46270.1 | EMBL:AY063093 | Unigene:At.19966 |
| ncoils:Coil | Symbol:GBF3 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009719 | GO:GO:0009737 | GO:GO:0009987 | GO:GO:0043565 |
| GO:GO:0044212 | InterPro:IPR004827 | InterPro:MFMR | RefSeq:NP_001323456.1 | RefSeq:NP_001323457.1 | RefSeq:NP_182150.1 |
| RefSeq:NP_850449.1 | UniProt:P42776 | PFAM:PF00170 | PFAM:PF07777 | PFAM:PF16596 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007095 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020100 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | ScanProsite:PS00036 | PFscan:PS50217 |
| PANTHER:PTHR22952 | PANTHER:PTHR22952:SF230 | SMART:SM00338 | SUPFAM:SSF57959 | EMBL:U17891 | EMBL:U51850 |
| UniParc:UPI00000016EB | EMBL:X63896 | InterPro:bZIP | SEG:seg | : | : |
Description
GBF3G-box-binding factor 3 [Source:UniProtKB/Swiss-Prot;Acc:P42776]
Coordinates
chr2:+:19000180..19003403
Molecular Weight (calculated)
41116.0 Da
IEP (calculated)
9.713
GRAVY (calculated)
-0.953
Length
382 amino acids
Sequence
(BLAST)
(BLAST)
001: MGNSSEEPKP PTKSDKPSSP PVDQTNVHVY PDWAAMQAYY GPRVAMPPYY NSAMAASGHP PPPYMWNPQH MMSPYGAPYA AVYPHGGGVY AHPGIPMGSL
101: PQGQKDPPLT TPGTLLSIDT PTKSTGNTDN GLMKKLKEFD GLAMSLGNGN PENGADEHKR SRNSSETDGS TDGSDGNTTG ADEPKLKRSR EGTPTKDGKQ
201: LVQASSFHSV SPSSGDTGVK LIQGSGAILS PGVSANSNPF MSQSLAMVPP ETWLQNEREL KRERRKQSNR ESARRSRLRK QAETEELARK VEALTAENMA
301: LRSELNQLNE KSDKLRGANA TLLDKLKCSE PEKRVPANML SRVKNSGAGD KNKNQGDNDS NSTSKLHQLL DTKPRAKAVA AG
101: PQGQKDPPLT TPGTLLSIDT PTKSTGNTDN GLMKKLKEFD GLAMSLGNGN PENGADEHKR SRNSSETDGS TDGSDGNTTG ADEPKLKRSR EGTPTKDGKQ
201: LVQASSFHSV SPSSGDTGVK LIQGSGAILS PGVSANSNPF MSQSLAMVPP ETWLQNEREL KRERRKQSNR ESARRSRLRK QAETEELARK VEALTAENMA
301: LRSELNQLNE KSDKLRGANA TLLDKLKCSE PEKRVPANML SRVKNSGAGD KNKNQGDNDS NSTSKLHQLL DTKPRAKAVA AG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.