Factsheet for AT4G36730.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra011701.1-P	Field mustard	nucleus	85.71	86.26
CDX75592	Canola	nucleus	85.71	86.26
CDX69240	Canola	nucleus	85.08	85.62
CDY24770	Canola	nucleus	83.81	84.34
CDY35476	Canola	nucleus	83.49	84.03
Bra010572.1-P	Field mustard	nucleus	83.17	83.71
KRH69948	Soybean	nucleus	61.27	57.1
KRH08310	Soybean	nucleus	60.95	56.8
VIT_04s0023g01360.t01	Wine grape	nucleus	65.08	56.32
Solyc02g062950.2.1	Tomato	nucleus	60.32	55.72
Solyc02g085610.2.1	Tomato	nucleus	46.67	51.76
KRH76850	Soybean	nucleus	55.87	50.43
KRH28623	Soybean	nucleus	55.56	47.43
VIT_18s0001g12120.t01	Wine grape	nucleus	58.1	45.98
PGSC0003DMT400032960	Potato	nucleus	55.24	43.5
AT1G32150.1	Thale cress	nucleus	42.86	34.7
AT2G35530.1	Thale cress	nucleus	41.9	32.27
AT4G01120.1	Thale cress	nucleus	33.97	29.72
AT2G46270.1	Thale cress	nucleus	34.29	28.27
KRG89193	Soybean	nucleus	23.81	25.17

Protein Annotations

Gene3D:1.20.5.170	MapMan:15.5.4.1	EntrezGene:829826	UniProt:A0A178V1V9	ProteinID:AEE86694.1	ProteinID:AEE86695.1
EMBL:AF428382	EMBL:AJ843257	ArrayExpress:AT4G36730	EnsemblPlantsGene:AT4G36730	RefSeq:AT4G36730	TAIR:AT4G36730
RefSeq:AT4G36730-TAIR-G	EnsemblPlants:AT4G36730.1	TAIR:AT4G36730.1	EMBL:AY054574	EMBL:AY064670	Unigene:At.62
ProteinID:CAA68197.1	ProteinID:CAB16806.1	ProteinID:CAB80339.1	ncoils:Coil	Symbol:GBF1	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565
GO:GO:0044212	InterPro:IPR004827	InterPro:MFMR	RefSeq:NP_195391.1	RefSeq:NP_849510.1	ProteinID:OAO99072.1
UniProt:P42774	PFAM:PF00170	PFAM:PF07777	PO:PO:0000013	PO:PO:0000037	PO:PO:0000230
PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507
PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123
PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009
PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032
PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100
PO:PO:0020137	PO:PO:0025022	PO:PO:0025281	ScanProsite:PS00036	PFscan:PS50217	PANTHER:PTHR22952
PANTHER:PTHR22952:SF123	UniProt:Q5K1L6	SMART:SM00338	SUPFAM:SSF57959	UniParc:UPI000012B226	EMBL:X63894
InterPro:bZIP	SEG:seg	:	:	:	:

Description

GBF1Z-box binding factor 2 protein [Source:UniProtKB/TrEMBL;Acc:Q5K1L6]

Coordinates

chr4:-:17309612..17312488

Molecular Weight (calculated)

33934.1 Da

IEP (calculated)

6.377

GRAVY (calculated)

-1.100

Length

315 amino acids

Sequence
(BLAST)

001: MGTSEDKMPF KTTKPTSSAQ EVPPTPYPDW QNSMQAYYGG GGTPNPFFPS PVGSPSPHPY MWGAQHHMMP PYGTPVPYPA MYPPGAVYAH PSMPMPPNSG
101: PTNKEPAKDQ ASGKKSKGNS KKKAEGGDKA LSGSGNDGAS HSDESVTAGS SDENDENANQ QEQGSIRKPS FGQMLADASS QSTTGEIQGS VPMKPVAPGT
201: NLNIGMDLWS SQAGVPVKDE RELKRQKRKQ SNRESARRSR LRKQAECEQL QQRVESLSNE NQSLRDELQR LSSECDKLKS ENNSIQDELQ RVLGAEAVAN
301: LEQNAAGSKD GEGTN

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.