Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, golgi
Predictor Summary:
Predictor Summary:
- plastid 4
- golgi 2
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os08t0116900-01 | golgi |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G32930.1 | Os08t0116900-01 | AT1G32930.1 | 24693939 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU1Hr1G010190.1 | Barley | cytosol | 18.56 | 88.89 |
| EES14424 | Sorghum | golgi, mitochondrion | 81.44 | 82.08 |
| TraesCS7D01G313600.2 | Wheat | golgi | 80.67 | 80.67 |
| TraesCS7A01G316500.2 | Wheat | golgi, mitochondrion, plastid | 80.15 | 76.04 |
| TraesCS7B01G217700.1 | Wheat | extracellular, golgi, peroxisome | 79.64 | 75.74 |
| Os02t0164300-02 | Rice | cytosol | 32.73 | 69.78 |
| Zm00001d035090_P002 | Maize | mitochondrion | 73.2 | 63.53 |
| Bra023296.1-P | Field mustard | golgi | 56.19 | 55.75 |
| CDX93812 | Canola | golgi | 55.93 | 55.5 |
| VIT_02s0025g02830.t01 | Wine grape | golgi | 57.22 | 54.81 |
| AT1G32930.1 | Thale cress | golgi | 55.93 | 54.39 |
| Os06t0679500-01 | Rice | golgi | 52.58 | 51.65 |
| Os09t0452900-01 | Rice | golgi | 51.55 | 50.89 |
| Os03t0577500-01 | Rice | golgi, peroxisome, plastid | 52.58 | 50.25 |
| Os02t0566800-01 | Rice | cytosol, endoplasmic reticulum, extracellular, golgi, peroxisome, plasma membrane, vacuole | 50.26 | 50.13 |
| CDY54843 | Canola | golgi | 56.19 | 49.77 |
| Os01t0877400-01 | Rice | golgi | 50.26 | 47.79 |
| Os05t0427200-01 | Rice | cytosol, golgi, plastid | 50.77 | 46.9 |
| Os08t0386700-01 | Rice | mitochondrion | 30.67 | 34.69 |
| Os06t0176200-01 | Rice | golgi, mitochondrion, peroxisome, plastid | 30.67 | 33.62 |
| Os06t0177300-01 | Rice | golgi, mitochondrion, peroxisome, plastid | 30.67 | 33.62 |
| Os06t0156900-01 | Rice | golgi, plastid | 27.06 | 28.53 |
| Os05t0199500-01 | Rice | mitochondrion | 24.74 | 24.62 |
Protein Annotations
| MapMan:21.4.1.1.5.3 | EntrezGene:4344520 | EMBL:AK111853 | EMBL:AK112114 | ProteinID:BAD33095.1 | ProteinID:BAF22771.1 |
| ProteinID:BAT03560.1 | InterPro:DUF4094 | GO:GO:0000003 | GO:GO:0000139 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005794 | GO:GO:0005975 |
| GO:GO:0006464 | GO:GO:0006486 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008378 |
| GO:GO:0009058 | GO:GO:0009790 | GO:GO:0009791 | GO:GO:0009793 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016740 | GO:GO:0016757 | GO:GO:0019538 | InterPro:Glyco_trans_31 | EnsemblPlantsGene:Os08g0116900 |
| EnsemblPlants:Os08t0116900-01 | PFAM:PF01762 | PFAM:PF13334 | PANTHER:PTHR11214 | PANTHER:PTHR11214:SF123 | UniProt:Q69UI5 |
| TMHMM:TMhelix | UniParc:UPI000023AE21 | RefSeq:XP_015648629.1 | SEG:seg | : | : |
Description
Similar to Avr9 elicitor response-like protein. (Os08t0116900-01)
Coordinates
chr8:-:940888..944407
Molecular Weight (calculated)
43798.1 Da
IEP (calculated)
7.867
GRAVY (calculated)
-0.379
Length
388 amino acids
Sequence
(BLAST)
(BLAST)
001: MFAPAAAARP HKQAPLARVP TRLVAALCTA CFFLGVCVVN RYWAVPELPD CRTKVNSDNP GAVMNQVSQT REVIIALDRT ISEIEMRLAA ARTMQARSQG
101: LSPSDSGSDQ GSTRARLFFV MGIVTTFANR KRRDSIRQTW LPQGEHLQRL EKEKGVVIRF VIGRSANPSP DSEVERAIAA EDKEYNDILR LDHVERNGSL
201: PLKIQMFLST ALSIWDADFY VKVDDDVHVN IGITRSILAR HRSKPRVYIG CMKSGPVVDK NESKYYEPDH WKFGTEGNNY FRHATRQLYA VTRDLATYIS
301: ANRHILHKYS NEDVSFGSWL IGLDVEHVDE RSLCCGTPPD CEWKAQAGNP CAASFDWNCT GICNPVERME EVHRRCWEGH VADLQAQF
101: LSPSDSGSDQ GSTRARLFFV MGIVTTFANR KRRDSIRQTW LPQGEHLQRL EKEKGVVIRF VIGRSANPSP DSEVERAIAA EDKEYNDILR LDHVERNGSL
201: PLKIQMFLST ALSIWDADFY VKVDDDVHVN IGITRSILAR HRSKPRVYIG CMKSGPVVDK NESKYYEPDH WKFGTEGNNY FRHATRQLYA VTRDLATYIS
301: ANRHILHKYS NEDVSFGSWL IGLDVEHVDE RSLCCGTPPD CEWKAQAGNP CAASFDWNCT GICNPVERME EVHRRCWEGH VADLQAQF
001: MSAKIKGEYS SRSFVSRKWT ILLCLGSFCV GMFFTNRMWN IPESKGMSHP SVTEAERLKL VSEGCNPKAL YQKEVKRDPQ ALFGEVANTH IALQTLDKTI
101: SSLEMELAAA RSVQESLQNG APLSDDMGKK QPQEQRRFLM VVGINTAFSS RKRRDSIRAT WMPQGEKRKR LEEEKGIIIR FVIGHSATTG GILDRAIEAE
201: DRKHGDFLRL DHVEGYLELS GKTKTYFSTA FSMWDADFYV KVDDDVHVNI ATLGETLVRH RKKPRVYIGC MKSGPVLSQK GVRYHEPEYW KFGENGNKYF
301: RHATGQLYAI SRDLASYISI NQHVLHKYAN EDVSLGAWFI GIDVKHIDDR RLCCGTPPDC EWKAQAGNIC VASFDWSCSG ICRSADRIKE VHRRCGEGEK
401: ALWSATF
101: SSLEMELAAA RSVQESLQNG APLSDDMGKK QPQEQRRFLM VVGINTAFSS RKRRDSIRAT WMPQGEKRKR LEEEKGIIIR FVIGHSATTG GILDRAIEAE
201: DRKHGDFLRL DHVEGYLELS GKTKTYFSTA FSMWDADFYV KVDDDVHVNI ATLGETLVRH RKKPRVYIGC MKSGPVLSQK GVRYHEPEYW KFGENGNKYF
301: RHATGQLYAI SRDLASYISI NQHVLHKYAN EDVSLGAWFI GIDVKHIDDR RLCCGTPPDC EWKAQAGNIC VASFDWSCSG ICRSADRIKE VHRRCGEGEK
401: ALWSATF
Arabidopsis Description
B3GALT2Hexosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q3U9]
SUBAcon: [golgi,cytosol]
SUBAcon: [golgi,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.