Factsheet for TraesCS7A01G316500.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi, plastid

Predictor Summary:

plastid 1
mitochondrion 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, mitochondrion, plastid
Any Predictor:	golgi, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
PProwler:	mitochondrion
TargetP:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS7A01G316500.2	golgi
TraesCS7B01G217700.1	golgi
TraesCS7D01G313600.2	golgi

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G32930.1	TraesCS7A01G316500.2	AT1G32930.1	24693939
AT1G32930.1	TraesCS7B01G217700.1	AT1G32930.1	24693939
AT1G32930.1	TraesCS7D01G313600.2	AT1G32930.1	24693939

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G010190.1	Barley	cytosol	19.56	98.77
TraesCS7D01G313600.2	Wheat	golgi	90.22	95.1
TraesCS7B01G217700.1	Wheat	extracellular, golgi, peroxisome	94.13	94.36
Os08t0116900-01	Rice	golgi, mitochondrion	76.04	80.15
EES14424	Sorghum	golgi, mitochondrion	73.59	78.18
Zm00001d035090_P002	Maize	mitochondrion	67.24	61.52
Bra023296.1-P	Field mustard	golgi	51.59	53.96
CDX93812	Canola	golgi	51.34	53.71
VIT_02s0025g02830.t01	Wine grape	golgi	52.32	52.84
AT1G32930.1	Thale cress	golgi	50.86	52.13
TraesCS7A01G458600.1	Wheat	golgi	48.41	49.13
TraesCS6A01G138100.1	Wheat	golgi	47.19	48.25
CDY54843	Canola	golgi	51.59	48.17
TraesCS6A01G201400.2	Wheat	golgi	46.7	48.11
TraesCS7A01G330900.1	Wheat	cytosol, golgi, mitochondrion, plastid	46.94	48.0
TraesCS3A01G389200.1	Wheat	golgi, mitochondrion	44.99	45.66
TraesCS1A01G267200.1	Wheat	golgi	44.25	45.14
TraesCS5A01G235300.4	Wheat	golgi	46.7	44.94
TraesCS7A01G293200.1	Wheat	mitochondrion	29.1	34.49
TraesCS7A01G139800.1	Wheat	cytosol, golgi, mitochondrion, peroxisome, plastid	26.89	30.9
TraesCS7A01G115200.1	Wheat	plastid	25.67	28.93
TraesCS1A01G125600.1	Wheat	cytosol, golgi, peroxisome	23.72	25.8

Protein Annotations

MapMan:21.4.1.1.5.3	InterPro:DUF4094	GO:GO:0000003	GO:GO:0000139	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0005975
GO:GO:0006464	GO:GO:0006486	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0008378
GO:GO:0009058	GO:GO:0009790	GO:GO:0009791	GO:GO:0009793	GO:GO:0009987	GO:GO:0016020
GO:GO:0016740	GO:GO:0019538	InterPro:Glyco_trans_31	PFAM:PF01762	PFAM:PF13334	PANTHER:PTHR11214
PANTHER:PTHR11214:SF123	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS7A01G316500	EnsemblPlants:TraesCS7A01G316500.2	SEG:seg	:

Description

No Description!

Coordinates

chr7A:-:452372666..452376291

Molecular Weight (calculated)

45388.0 Da

IEP (calculated)

8.373

GRAVY (calculated)

-0.457

Length

409 amino acids

Sequence
(BLAST)

001: MSRVHGALSA TALQVSRADQ GAKAMAASRP HHRAPPGRVP TRCVAALCAA CFLLGVCVXX XYWAVPEPPD CRSKANSGRS RAMLSQAQTR EVVIALDRTI
101: SDIEMRLAAA RAAQMRSQGV SPSDSAADQG NMRPRLLFVM GIMTTFNNRR RRDSIRKTWM PEGEGLRRLE KDKGIVMRFV IGRSANPGPD SEVERAMDAE
201: DKEYNDILRL NHVEGQDGLP LKIQMFLSTA LSTWDADFYV KVDDDVHVNI GITRSILARH RSKPRVYIGC MKSGPVIANN ESKYYEPDHW KFGTAGNNYF
301: RHATRQLYAI TRDLATYVSA NKHILHKYTN EDVSFGSWLI GLDVEHVDER SLCCGIPPDC EWKAQAGNPC GASFDWNCSG VCNPAERMEE VHRRCWEHRE
401: AALPQAQES

Best Arabidopsis Sequence Match ( AT1G05170.2 )
(BLAST)

001: MSAKIKGEYS SRSFVSRKWT ILLCLGSFCV GMFFTNRMWN IPESKGMSHP SVTEAERLKL VSEGCNPKAL YQKEVKRDPQ ALFGEVANTH IALQTLDKTI
101: SSLEMELAAA RSVQESLQNG APLSDDMGKK QPQEQRRFLM VVGINTAFSS RKRRDSIRAT WMPQGEKRKR LEEEKGIIIR FVIGHSATTG GILDRAIEAE
201: DRKHGDFLRL DHVEGYLELS GKTKTYFSTA FSMWDADFYV KVDDDVHVNI ATLGETLVRH RKKPRVYIGC MKSGPVLSQK GVRYHEPEYW KFGENGNKYF
301: RHATGQLYAI SRDLASYISI NQHVLHKYAN EDVSLGAWFI GIDVKHIDDR RLCCGTPPDC EWKAQAGNIC VASFDWSCSG ICRSADRIKE VHRRCGEGEK
401: ALWSATF

Arabidopsis Description

B3GALT2Hexosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q3U9]
SUBAcon: [golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.