Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, mitochondrion, plastid, cytosol, golgi
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 3
- golgi 1
- cytosol 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G141100.1 | Wheat | cytosol, golgi, mitochondrion, peroxisome, plastid | 98.31 | 98.87 |
| TraesCS7B01G041500.1 | Wheat | cytosol, golgi, mitochondrion, peroxisome, plastid | 95.22 | 94.69 |
| HORVU7Hr1G028670.1 | Barley | cytosol, golgi, plastid | 93.54 | 88.56 |
| Os06t0177300-01 | Rice | golgi, mitochondrion, peroxisome, plastid | 84.83 | 85.31 |
| Os06t0176200-01 | Rice | golgi, mitochondrion, peroxisome, plastid | 84.83 | 85.31 |
| Zm00001d045146_P002 | Maize | plasma membrane | 80.06 | 80.74 |
| EER87954 | Sorghum | plastid | 79.49 | 80.17 |
| OQU75947 | Sorghum | mitochondrion | 73.6 | 71.58 |
| GSMUA_Achr8P24200_001 | Banana | cytosol | 71.91 | 71.11 |
| VIT_04s0008g06480.t01 | Wine grape | golgi | 61.24 | 64.31 |
| KRH05191 | Soybean | mitochondrion, plastid | 57.02 | 63.64 |
| Bra011324.1-P | Field mustard | plastid | 62.08 | 63.51 |
| CDY11534 | Canola | plastid | 61.52 | 63.48 |
| CDX75222 | Canola | plastid | 61.8 | 63.22 |
| AT4G32120.1 | Thale cress | golgi, nucleus, peroxisome | 61.24 | 63.19 |
| Bra007804.1-P | Field mustard | plastid | 61.24 | 63.01 |
| CDY58927 | Canola | cytosol | 60.67 | 62.79 |
| CDX68818 | Canola | plastid | 61.52 | 62.75 |
| AT2G25300.1 | Thale cress | plastid | 60.11 | 61.85 |
| Solyc08g029170.2.1 | Tomato | plastid | 59.83 | 60.0 |
| KRH15831 | Soybean | mitochondrion | 62.36 | 55.64 |
| TraesCS7A01G293200.1 | Wheat | mitochondrion | 44.66 | 46.09 |
| TraesCS6A01G138100.1 | Wheat | golgi | 34.83 | 31.0 |
| TraesCS7A01G458600.1 | Wheat | golgi | 34.55 | 30.52 |
| TraesCS7A01G330900.1 | Wheat | cytosol, golgi, mitochondrion, plastid | 33.99 | 30.25 |
| TraesCS1A01G267200.1 | Wheat | golgi | 33.99 | 30.17 |
| TraesCS6A01G201400.2 | Wheat | golgi | 32.87 | 29.47 |
| TraesCS3A01G389200.1 | Wheat | golgi, mitochondrion | 31.74 | 28.04 |
| TraesCS5A01G235300.4 | Wheat | golgi | 32.87 | 27.53 |
| TraesCS7A01G316500.2 | Wheat | golgi, mitochondrion, plastid | 30.9 | 26.89 |
| TraesCS7A01G115200.1 | Wheat | plastid | 25.28 | 24.79 |
| TraesCS1A01G125600.1 | Wheat | cytosol, golgi, peroxisome | 25.84 | 24.47 |
Protein Annotations
| MapMan:18.1.2.1.2 | InterPro:DUF4094 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005975 |
| GO:GO:0006464 | GO:GO:0006486 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008378 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016740 | GO:GO:0019538 | InterPro:Glyco_trans_31 | PFAM:PF01762 |
| PFAM:PF13334 | PANTHER:PTHR11214 | PANTHER:PTHR11214:SF124 | EnsemblPlantsGene:TraesCS7A01G139800 | EnsemblPlants:TraesCS7A01G139800.1 | SEG:seg |
Description
No Description!
Coordinates
chr7A:+:91509435..91516361
Molecular Weight (calculated)
39422.9 Da
IEP (calculated)
7.779
GRAVY (calculated)
-0.282
Length
356 amino acids
Sequence
(BLAST)
(BLAST)
001: METLASVMRR DNRRFKPPPS SSAAAASASA GRAPLVMAFL ACLAWVYVAG RLWQDAQTRA VLSGLLQKST SNLPKEISVD DKLRDLGCTG IGRKIAEAEM
101: DIAKAKSEGY LWGNGTGGTG TEGSGRKKFL AVIGVYTGFG SRLKRNTFRG SWMPRGDALK TLEEKGVVIR FVIGRSPNRG DSLDRNINEE NRKTNDFLIL
201: ESHEEAAEEL PKKVKFFFSA AIEAWDAEFY VKIDDNINLD LAGLIEMLNI RRGSPGLYMG CMKSGAVVSE EEQQWYEPEW WKFGDSRTYF RHAAGSLFIL
301: SNNLARYINI NSASLQSYAH DDISVGSWMM GLNATYVDDD RLCCLSAVQE KVCSFG
101: DIAKAKSEGY LWGNGTGGTG TEGSGRKKFL AVIGVYTGFG SRLKRNTFRG SWMPRGDALK TLEEKGVVIR FVIGRSPNRG DSLDRNINEE NRKTNDFLIL
201: ESHEEAAEEL PKKVKFFFSA AIEAWDAEFY VKIDDNINLD LAGLIEMLNI RRGSPGLYMG CMKSGAVVSE EEQQWYEPEW WKFGDSRTYF RHAAGSLFIL
301: SNNLARYINI NSASLQSYAH DDISVGSWMM GLNATYVDDD RLCCLSAVQE KVCSFG
001: MESLPTTVSG KSDRRGRFSK SQNTSKPSLI LAFFSCLAWL YVAGRLWQDA QYRAALNTVL KMNYDQRPKV LTVEDKLVVL GCKDLERRIV ETEMELAQAK
101: SQGYLKKQKS VSSSGKKMLA VIGVYTGFGS HLKRNKFRGS WMPRDDALKK LEERGVVIRF VIGRSANRGD SLDRKIDEEN RATKDFLILE NHEEAQEELP
201: KKVKFFYSAA VQNWDAEFYV KVDDNVDLDL EGMIALLESR RSQDGAYIGC MKSGDVITEE GSQWYEPEWW KFGDDKSYFR HATGSLVILS KNLAQYVNIN
301: SGLLKTYAFD DTTIGSWMIG VQATYIDDNR LCCSSTRQEK VCSMA
101: SQGYLKKQKS VSSSGKKMLA VIGVYTGFGS HLKRNKFRGS WMPRDDALKK LEERGVVIRF VIGRSANRGD SLDRKIDEEN RATKDFLILE NHEEAQEELP
201: KKVKFFYSAA VQNWDAEFYV KVDDNVDLDL EGMIALLESR RSQDGAYIGC MKSGDVITEE GSQWYEPEWW KFGDDKSYFR HATGSLVILS KNLAQYVNIN
301: SGLLKTYAFD DTTIGSWMIG VQATYIDDNR LCCSSTRQEK VCSMA
Arabidopsis Description
HPGT2Hydroxyproline O-galactosyltransferase HPGT2 [Source:UniProtKB/Swiss-Prot;Acc:Q94A05]
SUBAcon: [peroxisome,golgi,nucleus]
SUBAcon: [peroxisome,golgi,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.