Factsheet for Bra011324.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 2
plastid 4
mitochondrion 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX75222	Canola	plastid	99.43	99.43
CDX68818	Canola	plastid	98.85	98.57
AT4G32120.1	Thale cress	golgi, nucleus, peroxisome	91.67	92.46
Bra007804.1-P	Field mustard	plastid	83.33	83.81
VIT_04s0008g06480.t01	Wine grape	golgi	74.71	76.7
KRH05191	Soybean	mitochondrion, plastid	68.39	74.61
Solyc08g029170.2.1	Tomato	plastid	70.69	69.3
KRH15831	Soybean	mitochondrion	74.71	65.16
EER87954	Sorghum	plastid	66.09	65.16
GSMUA_Achr8P24200_001	Banana	cytosol	67.24	65.0
Os06t0177300-01	Rice	golgi, mitochondrion, peroxisome, plastid	65.8	64.69
Os06t0176200-01	Rice	golgi, mitochondrion, peroxisome, plastid	65.8	64.69
Zm00001d045146_P002	Maize	plasma membrane	65.52	64.59
TraesCS7D01G141100.1	Wheat	cytosol, golgi, mitochondrion, peroxisome, plastid	63.51	62.43
TraesCS7A01G139800.1	Wheat	cytosol, golgi, mitochondrion, peroxisome, plastid	63.51	62.08
TraesCS7B01G041500.1	Wheat	cytosol, golgi, mitochondrion, peroxisome, plastid	62.93	61.17
OQU75947	Sorghum	mitochondrion	62.93	59.84
HORVU7Hr1G028670.1	Barley	cytosol, golgi, plastid	63.51	58.78
Bra003064.1-P	Field mustard	mitochondrion	39.37	41.14
Bra022647.1-P	Field mustard	mitochondrion	40.23	34.74
Bra031357.1-P	Field mustard	cytosol	31.9	33.23
Bra023296.1-P	Field mustard	golgi	36.78	32.74
Bra019835.1-P	Field mustard	mitochondrion	35.63	31.71
Bra010198.1-P	Field mustard	vacuole	35.63	31.47
Bra005595.1-P	Field mustard	golgi	36.49	31.05
Bra010422.1-P	Field mustard	cytosol, golgi	36.21	31.03
Bra015654.1-P	Field mustard	golgi	33.91	30.81
Bra016393.1-P	Field mustard	golgi	34.2	30.51
Bra015395.1-P	Field mustard	plastid	36.21	29.58
Bra012302.1-P	Field mustard	golgi	33.62	29.47
Bra019081.1-P	Field mustard	cytosol	32.18	29.02
Bra034289.1-P	Field mustard	plastid	25.0	23.97
Bra027291.1-P	Field mustard	mitochondrion	23.56	23.91
Bra038114.1-P	Field mustard	mitochondrion	23.56	23.56
Bra001576.1-P	Field mustard	mitochondrion	22.41	22.81

Protein Annotations

MapMan:18.1.2.1.2	EnsemblPlantsGene:Bra011324	EnsemblPlants:Bra011324.1	EnsemblPlants:Bra011324.1-P	ncoils:Coil	InterPro:DUF4094
GO:GO:0000139	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005794	GO:GO:0005975	GO:GO:0006464	GO:GO:0006486	GO:GO:0008150
GO:GO:0008152	GO:GO:0008378	GO:GO:0009058	GO:GO:0009987	GO:GO:0010405	GO:GO:0016020
GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	GO:GO:0018258	GO:GO:0019538	GO:GO:1990714
InterPro:Glyco_trans_31	UniProt:M4D4C0	PFAM:PF01762	PFAM:PF13334	PANTHER:PTHR11214	PANTHER:PTHR11214:SF124
UniParc:UPI000254661D	SEG:seg	:	:	:	:

Description

AT4G32120 (E=7e-172) | galactosyltransferase family protein

Coordinates

chrA01:+:2728517..2730754

Molecular Weight (calculated)

39377.0 Da

IEP (calculated)

8.537

GRAVY (calculated)

-0.432

Length

348 amino acids

Sequence
(BLAST)

001: MESLPTTVSS KSDRRGRSSK SQNTSKPSLI MAFFSCLAWL YVAGRLWQDA QHRVALNIVL QKNLELRPKA LTVDDKLMVL GCKDLERRIV ETEMELAQAK
101: SQGYLKNQKS LSSASSGNKK MLAVIGVYTG FGSHLKRNKF RGSWMPRDDA LKKLEERGVV IRFVIGRSAN RGDSLDRKID QENLATKDFL ILENHEEAQE
201: ELPKKVKFFY SAAVQNWDAE FYVKVDDNVD LDLEGLIGLL ESRRGQDGAY IGCMKSGDVV TQEGSQWYEP EWWKFGDDKS YFRHATGSLV ILSKNLAQYI
301: NINSGLLKTY AFDDTTIGSW MIGVQATYID DNRLCCSSTR QEKVCSMA

Best Arabidopsis Sequence Match ( AT4G32120.1 )
(BLAST)

001: MESLPTTVSG KSDRRGRFSK SQNTSKPSLI LAFFSCLAWL YVAGRLWQDA QYRAALNTVL KMNYDQRPKV LTVEDKLVVL GCKDLERRIV ETEMELAQAK
101: SQGYLKKQKS VSSSGKKMLA VIGVYTGFGS HLKRNKFRGS WMPRDDALKK LEERGVVIRF VIGRSANRGD SLDRKIDEEN RATKDFLILE NHEEAQEELP
201: KKVKFFYSAA VQNWDAEFYV KVDDNVDLDL EGMIALLESR RSQDGAYIGC MKSGDVITEE GSQWYEPEWW KFGDDKSYFR HATGSLVILS KNLAQYVNIN
301: SGLLKTYAFD DTTIGSWMIG VQATYIDDNR LCCSSTRQEK VCSMA

Arabidopsis Description

HPGT2Hydroxyproline O-galactosyltransferase HPGT2 [Source:UniProtKB/Swiss-Prot;Acc:Q94A05]
SUBAcon: [peroxisome,golgi,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.