Factsheet for Bra003064.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY14386	Canola	mitochondrion	98.8	97.05
CDY35642	Canola	mitochondrion	97.6	96.15
AT5G53340.1	Thale cress	mitochondrion	93.09	91.72
Bra022647.1-P	Field mustard	mitochondrion	91.89	75.93
KRH64518	Soybean	mitochondrion	70.57	68.51
KRH53422	Soybean	mitochondrion	70.27	68.22
GSMUA_Achr4P00940_001	Banana	mitochondrion	66.97	66.17
VIT_16s0050g02460.t01	Wine grape	mitochondrion	65.17	63.45
PGSC0003DMT400023412	Potato	mitochondrion	64.86	61.54
Os08t0386700-01	Rice	mitochondrion	61.26	59.48
EES13774	Sorghum	mitochondrion	61.26	58.96
TraesCS7D01G286500.1	Wheat	mitochondrion	60.06	57.97
TraesCS7A01G293200.1	Wheat	mitochondrion	60.06	57.97
HORVU7Hr1G063510.5	Barley	mitochondrion	60.06	57.8
TraesCS7B01G185900.1	Wheat	mitochondrion	59.16	57.1
Zm00001d050251_P002	Maize	mitochondrion	57.96	47.54
Zm00001d032267_P003	Maize	mitochondrion	54.95	45.07
Bra007804.1-P	Field mustard	plastid	41.74	40.17
Bra011324.1-P	Field mustard	plastid	41.14	39.37
Bra019835.1-P	Field mustard	mitochondrion	40.84	34.78
Bra031357.1-P	Field mustard	cytosol	34.83	34.73
Bra005595.1-P	Field mustard	golgi	42.34	34.47
Bra023296.1-P	Field mustard	golgi	39.94	34.02
Bra010198.1-P	Field mustard	vacuole	40.24	34.01
Bra010422.1-P	Field mustard	cytosol, golgi	41.44	33.99
Bra015395.1-P	Field mustard	plastid	41.74	32.63
Bra019081.1-P	Field mustard	cytosol	37.24	32.12
Bra015654.1-P	Field mustard	golgi	36.94	32.11
Bra016393.1-P	Field mustard	golgi	37.54	32.05
Bra012302.1-P	Field mustard	golgi	35.44	29.72
Bra034289.1-P	Field mustard	plastid	25.23	23.14
Bra001576.1-P	Field mustard	mitochondrion	23.12	22.51
Bra027291.1-P	Field mustard	mitochondrion	23.12	22.45
Bra038114.1-P	Field mustard	mitochondrion	23.42	22.41

Protein Annotations

MapMan:18.1.2.1.2	EnsemblPlantsGene:Bra003064	EnsemblPlants:Bra003064.1	EnsemblPlants:Bra003064.1-P	ncoils:Coil	InterPro:DUF4094
GO:GO:0000139	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005794	GO:GO:0005975	GO:GO:0006464	GO:GO:0006486	GO:GO:0008150
GO:GO:0008152	GO:GO:0008378	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016740	GO:GO:0016757	GO:GO:0019538	InterPro:Glyco_trans_31	UniProt:M4CFT2	PFAM:PF01762
PFAM:PF13334	PANTHER:PTHR11214	PANTHER:PTHR11214:SF224	TMHMM:TMhelix	UniParc:UPI0002543AF4	:

Description

AT5G53340 (E=1e-181) | galactosyltransferase family protein

Coordinates

chrA10:-:5519167..5521320

Molecular Weight (calculated)

37350.6 Da

IEP (calculated)

9.509

GRAVY (calculated)

-0.330

Length

333 amino acids

Sequence
(BLAST)

001: MARKGSRMRL TSSRVSSLLI SMFATFASFY VAGRLWQESQ TRVHLIKELD RVTGQGKSAI SVDDTLKIIA CREQKKTLAA LEIQLSAARQ EGFVSKTPKH
101: TDGTETKKRP LVVIGIMTSL GNKKKRDAVR QAWMGTGASL KKIETEKGVI ARFVIGRSAN KGDSMDKSID AENSQTDDFI ILDDVVEAPE EASKKVKLFF
201: AYAADRWDAQ FYAKSIDNIY VNIDALGSTL AAHLENPRAY IGCMKSGEVF SEPNQKWYEP EWWKFGDKKA YFRHAYGEMY VITHALARFV SINRNILHSY
301: AHDDVSTGSW FVGLDVKHVD EGKFCCSAWS SGM

Best Arabidopsis Sequence Match ( AT5G53340.2 )
(BLAST)

001: MARKGSSIRL SSSRISTLLL FMFATFASFY VAGRLWQESQ TRVHLINELD RVTGQGKSAI SVDDTLKIIA CREQKKTLAA LEMELSSARQ EGFVSKSPKL
101: ADGTETKKRP LVVIGIMTSL GNKKKRDAVR QAWMGTGASL KKLESEKGVI ARFVIGRSAN KGDSMDKSID TENSQTDDFI ILDDVVEAPE EASKKVKLFF
201: AYAADRWDAQ FYAKAIDNIY VNIDALGTTL AAHLENPRAY IGCMKSGEVF SEPNHKWYEP EWWKFGDKKA YFRHAYGEMY VITHALARFV SINRDILHSY
301: AHDDVSTGSW FVGLDVKHVD EGKFCCSAWS SAICAGV

Arabidopsis Description

HPTG1Hydroxyproline O-galactosyltransferase HPGT1 [Source:UniProtKB/Swiss-Prot;Acc:Q94F27]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.