Factsheet for Bra034289.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 2
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY35316	Canola	plastid	99.45	99.45
AT2G26100.1	Thale cress	plastid	87.33	85.44
VIT_04s0008g01270.t01	Wine grape	plastid	69.7	70.08
VIT_13s0158g00110.t01	Wine grape	cytosol	17.63	69.57
Bra027291.1-P	Field mustard	mitochondrion	55.65	58.89
Bra001576.1-P	Field mustard	mitochondrion	54.82	58.19
Bra038114.1-P	Field mustard	mitochondrion	55.65	58.05
GSMUA_Achr6P05430_001	Banana	endoplasmic reticulum, nucleus, plastid	56.2	54.26
Os05t0199500-01	Rice	mitochondrion	52.07	48.46
TraesCS1A01G125600.1	Wheat	cytosol, golgi, peroxisome	50.14	48.4
TraesCS1D01G127900.1	Wheat	cytosol, golgi, peroxisome	49.86	48.14
TraesCS1B01G144600.1	Wheat	cytosol, golgi, peroxisome	49.86	48.14
Zm00001d009997_P001	Maize	plasma membrane	48.21	46.67
EES19194	Sorghum	golgi, peroxisome, plastid	47.93	46.4
HORVU1Hr1G029110.2	Barley	cytosol, plasma membrane, plastid	49.59	40.09
Bra031357.1-P	Field mustard	cytosol	26.17	28.44
Bra019081.1-P	Field mustard	cytosol	29.75	27.98
Bra010422.1-P	Field mustard	cytosol, golgi	31.13	27.83
Bra023296.1-P	Field mustard	golgi	29.2	27.11
Bra019835.1-P	Field mustard	mitochondrion	28.1	26.09
Bra016393.1-P	Field mustard	golgi	27.82	25.9
Bra015654.1-P	Field mustard	golgi	27.0	25.59
Bra015395.1-P	Field mustard	plastid	29.75	25.35
Bra003064.1-P	Field mustard	mitochondrion	23.14	25.23
Bra005595.1-P	Field mustard	golgi	28.37	25.18
Bra007804.1-P	Field mustard	plastid	23.97	25.14
Bra010198.1-P	Field mustard	vacuole	27.27	25.13
Bra011324.1-P	Field mustard	plastid	23.97	25.0
Bra012302.1-P	Field mustard	golgi	26.45	24.18
Bra022647.1-P	Field mustard	mitochondrion	23.97	21.59

Protein Annotations

MapMan:21.4.1.1.5.3	EnsemblPlantsGene:Bra034289	EnsemblPlants:Bra034289.1	EnsemblPlants:Bra034289.1-P	ncoils:Coil	GO:GO:0000139
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005794	GO:GO:0005975	GO:GO:0006464	GO:GO:0006486	GO:GO:0008150	GO:GO:0008152
GO:GO:0008378	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740
GO:GO:0016757	GO:GO:0019538	InterPro:Glyco_trans_31	UniProt:M4EZP6	PFAM:PF01762	PANTHER:PTHR11214
PANTHER:PTHR11214:SF85	TMHMM:TMhelix	UniParc:UPI00025450EB	SEG:seg	:	:

Description

AT2G26100 (E=3e-159) | galactosyltransferase family protein

Coordinates

chrA04:-:11673918..11675841

Molecular Weight (calculated)

40428.5 Da

IEP (calculated)

8.784

GRAVY (calculated)

-0.298

Length

363 amino acids

Sequence
(BLAST)

001: MPLFSHRFTT ASSTGPATPS YYSKPSKSHK HSSSASRVHV AIVLFSLVSL FIGLAGTIFA ITSSGGPSSV YRCGGSKDTS RVFGSRKLGG NGGVLPERRK
101: VIGLVGIQTG FDSGDRRAAL RSTWFPSDPD ALLRLEQATG LAFRFVIGRS KDEKKMAELE KEIKEHRDFV LLDDVEEEYL RLPYKTLAFF KAAFKLFEAD
201: YYVKADDDIY LRPDRLGTLL AKERLHSQTY IGCMKKGPVI TNPKLKWYEK QGNLIGNEYF LHAYGPMYVL SAEIVASLAS ARNGSLRMFN NEDVTIGSWM
301: LAMDVHHEDN RALCEPRCSP KSIAVWDIPK CSGLCNPESR LKELHNMEIC SKSPTLPPDD LDQ

Best Arabidopsis Sequence Match ( AT2G26100.1 )
(BLAST)

001: MPLFSHRFTT ASSSSPASPS YYNKPSSKTH KPNSSSSSYT SSRIHVAIIF FSLVSVFIGV AGTIFALSST GPASVYRCGG SKDTSRVVSA SRKLGGDGGN
101: NGVVVERRKL LGFVGIQTGF DSGDRRTALR STWFPSDPDS LLRLEQATGL AFRFVIGKSK DAKKMAELEK EIKEYRDFVL LDTEEEYIRL PYKTLAFFKA
201: AFKLFEADYY VKADDDIYLR PDRLATLLAN ERLHSQTYIG CMKKGPVITD PKLKWYEKQG NLIGNEYFLH AYGPIYVLSA EIVASLAAAR NGSLRMFNNE
301: DVTIGSWMLA MDVHHEDNRA LCDPHCSPKS IAVWDIPKCS GLCDPESRLK ELHKTDMCSK SPTLPPDDID Q

Arabidopsis Description

B3GALT12Hexosyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A178VU65]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.