Factsheet for GSMUA_Achr6P05430_001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plastid, nucleus

Predictor Summary:

nucleus 2
endoplasmic reticulum 2
plastid 2
extracellular 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, nucleus, plastid
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY42221	Canola	cytosol	22.87	66.15
VIT_13s0158g00110.t01	Wine grape	cytosol	15.43	63.04
VIT_04s0008g01270.t01	Wine grape	plastid	55.59	57.89
CDY35316	Canola	plastid	54.52	56.47
Bra034289.1-P	Field mustard	plastid	54.26	56.2
CDX77030	Canola	plastid	53.99	55.92
AT2G26100.1	Thale cress	plastid	53.19	53.91
TraesCS1B01G144600.1	Wheat	cytosol, golgi, peroxisome	53.46	53.46
TraesCS1A01G125600.1	Wheat	cytosol, golgi, peroxisome	53.46	53.46
TraesCS1D01G127900.1	Wheat	cytosol, golgi, peroxisome	53.19	53.19
GSMUA_Achr7P14080_001	Banana	golgi, plastid	47.87	52.33
Os05t0199500-01	Rice	mitochondrion	54.26	52.31
EES19194	Sorghum	golgi, peroxisome, plastid	50.53	50.67
Zm00001d009997_P001	Maize	plasma membrane	49.73	49.87
GSMUA_Achr10P...	Banana	mitochondrion	38.3	46.75
HORVU1Hr1G029110.2	Barley	cytosol, plasma membrane, plastid	52.66	44.1
GSMUA_Achr5P23050_001	Banana	cytosol, golgi, mitochondrion, plastid	30.05	28.25
GSMUA_Achr4P33450_001	Banana	golgi	28.72	26.8
GSMUA_Achr7P00260_001	Banana	golgi	28.46	26.35
GSMUA_Achr4P00940_001	Banana	mitochondrion	23.4	26.11
GSMUA_Achr8P23200_001	Banana	golgi	28.99	25.53
GSMUA_Achr4P23710_001	Banana	golgi	27.93	25.42
GSMUA_Achr8P08420_001	Banana	cytosol	26.06	24.81
GSMUA_Achr5P00690_001	Banana	golgi	26.33	24.69
GSMUA_Achr9P30290_001	Banana	cytosol	27.13	24.17
GSMUA_Achr8P24200_001	Banana	cytosol	22.87	23.89
GSMUA_Achr11P...	Banana	golgi	26.06	23.67

Protein Annotations

MapMan:21.4.1.1.5.3	GO:GO:0000139	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0005975	GO:GO:0006464	GO:GO:0006486
GO:GO:0008150	GO:GO:0008152	GO:GO:0008378	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr6G05430_001	EnsemblPlants:GSMUA_Achr6P05430_001
EnsemblPlants:GSMUA_Achr6T05430_001	InterPro:Glyco_trans_31	UniProt:M0T4E1	PFAM:PF01762	PANTHER:PTHR11214	PANTHER:PTHR11214:SF85
TMHMM:TMhelix	UniParc:UPI0002967984	SEG:seg	:	:	:

Description

Probable beta-1,3-galactosyltransferase 12 [Source:GMGC_GENE;Acc:GSMUA_Achr6G05430_001]

Coordinates

chr6:+:3648887..3654405

Molecular Weight (calculated)

42116.4 Da

IEP (calculated)

7.035

GRAVY (calculated)

-0.287

Length

376 amino acids

Sequence
(BLAST)

001: MPQYHHSSPY FDDDDDEELI KKRRKPPPRP SPFLTPSSPH PPRRALLILV ILSAVCLIVG IAGIAFAAAA IRRPPRIVTV FRCGRAEDTL RTFRSKSLAA
101: TGRPEEGVAA RPKVIGVVGV LTGFSSSDRR AALRDTWFPR DPDALSRLDH ATGLVFRFVI GQTKDPKKKA VLQKEVETHN DFMFVDADED NYKLPYKTVA
201: FFKAAFNLFD ADFYVKADDD IYLRPDRLAT LLAKDRAHRL TYIGCMKKGP VITDRNMKWF ESSGHLIGNE YFLHAHGPIY ALSADIVAAL ASARNDSLRM
301: FNNEDVTIGS WMLAMNVNHE DTKALCEPIC TSTSIAVWSN PRCLDPCDLK EKLMELQNVS MCSNSSTLPP EDDEDD

Best Arabidopsis Sequence Match ( AT2G26100.1 )
(BLAST)

001: MPLFSHRFTT ASSSSPASPS YYNKPSSKTH KPNSSSSSYT SSRIHVAIIF FSLVSVFIGV AGTIFALSST GPASVYRCGG SKDTSRVVSA SRKLGGDGGN
101: NGVVVERRKL LGFVGIQTGF DSGDRRTALR STWFPSDPDS LLRLEQATGL AFRFVIGKSK DAKKMAELEK EIKEYRDFVL LDTEEEYIRL PYKTLAFFKA
201: AFKLFEADYY VKADDDIYLR PDRLATLLAN ERLHSQTYIG CMKKGPVITD PKLKWYEKQG NLIGNEYFLH AYGPIYVLSA EIVASLAAAR NGSLRMFNNE
301: DVTIGSWMLA MDVHHEDNRA LCDPHCSPKS IAVWDIPKCS GLCDPESRLK ELHKTDMCSK SPTLPPDDID Q

Arabidopsis Description

B3GALT12Hexosyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A178VU65]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.