Factsheet for GSMUA_Achr8P08420_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 3
golgi 1
plastid 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	golgi	69.37	66.18
TraesCS1B01G278100.1	Wheat	golgi	62.78	61.85
TraesCS1D01G267300.1	Wheat	golgi	62.53	61.6
HORVU1Hr1G065460.2	Barley	golgi	62.53	61.6
TraesCS1A01G267200.1	Wheat	golgi	62.03	61.1
Bra010198.1-P	Field mustard	vacuole	60.0	60.15
CDX73278	Canola	vacuole	60.0	60.15
CDY67379	Canola	vacuole	60.0	60.15
KXG22053	Sorghum	golgi, plastid	61.77	60.1
Os01t0877400-01	Rice	golgi	62.03	60.05
KRH40026	Soybean	golgi	57.97	59.95
VIT_18s0089g01040.t01	Wine grape	endoplasmic reticulum, golgi	59.24	59.85
Os05t0427200-01	Rice	cytosol, golgi, plastid	63.29	59.52
PGSC0003DMT400082760	Potato	golgi	59.75	59.3
KRH23776	Soybean	golgi, vacuole	56.71	59.26
GSMUA_Achr5P23050_001	Banana	cytosol, golgi, mitochondrion, plastid	60.0	59.25
Solyc11g042810.1.1	Tomato	golgi	58.99	59.14
AT1G33430.2	Thale cress	golgi, vacuole	59.75	58.56
Zm00001d012234_P002	Maize	mitochondrion	62.28	58.16
TraesCS3A01G389200.1	Wheat	golgi, mitochondrion	58.99	57.82
TraesCS3B01G419800.1	Wheat	golgi	59.24	57.64
TraesCS3D01G380700.1	Wheat	mitochondrion	59.24	57.21
GSMUA_Achr8P23200_001	Banana	golgi	60.0	55.5
GSMUA_Achr4P33450_001	Banana	golgi	56.2	55.09
GSMUA_Achr4P23710_001	Banana	golgi	57.22	54.72
GSMUA_Achr7P00260_001	Banana	golgi	56.2	54.68
GSMUA_Achr5P00690_001	Banana	golgi	54.94	54.11
GSMUA_Achr9P30290_001	Banana	cytosol	53.42	50.0
OQU87975	Sorghum	cytosol	56.46	44.51
GSMUA_Achr4P00940_001	Banana	mitochondrion	36.2	42.43
GSMUA_Achr8P24200_001	Banana	cytosol	32.15	35.28
GSMUA_Achr7P14080_001	Banana	golgi, plastid	27.85	31.98
GSMUA_Achr10P...	Banana	mitochondrion	23.04	29.55
GSMUA_Achr6P05430_001	Banana	endoplasmic reticulum, nucleus, plastid	24.81	26.06

Protein Annotations

MapMan:21.4.1.1.5.3	Gene3D:3.90.550.50	InterPro:DUF4094	GO:GO:0000139	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0005975
GO:GO:0006464	GO:GO:0006486	GO:GO:0008150	GO:GO:0008152	GO:GO:0008378	GO:GO:0009058
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	GO:GO:0019538
EnsemblPlantsGene:GSMUA_Achr8G08420_001	EnsemblPlants:GSMUA_Achr8P08420_001	EnsemblPlants:GSMUA_Achr8T08420_001	InterPro:Glyco_trans_31	UniProt:M0TNP5	PFAM:PF01762
PFAM:PF13334	PANTHER:PTHR11214	PANTHER:PTHR11214:SF100	TMHMM:TMhelix	UniParc:UPI000295EB40	SEG:seg

Description

Probable beta-1,3-galactosyltransferase 8 [Source:GMGC_GENE;Acc:GSMUA_Achr8G08420_001]

Coordinates

chr8:+:5620031..5623633

Molecular Weight (calculated)

44256.7 Da

IEP (calculated)

8.420

GRAVY (calculated)

-0.427

Length

395 amino acids

Sequence
(BLAST)

001: MKAGIERPQQ QSEKRQRGRP PLRARAAALL CAACFLLGVL FSRGVDFLPS DDRARAASSS CDPNIANSAQ DCERNRRLGE PNPRDIRREV SNTRRAIWSL
101: EKFVASLETE LAAARTNSLG RGPKKAFVVV GINTAFSSKK RRESVRATWM PRGSKLRRLE EEKGVVVRFV IGRSATPGGA LDRAIDEEDA KTKDFLRLEH
201: LEGYHELSTK TKVFFATAVA TWDADFYAKV DDDVHVNLGM LIATLARHRT TPRVYIGCMK SDQVLFQKDA KYHEPEFWKF GEEGNKYFRH ATGQIYAISK
301: DLALYISTNA PILHKYANED VSLGSWLIGL EVEHIDERGM CCGTPPDCEW KIQSGDICIA SFDWTCSGVC KPVDRMVEVH SKCGEGNEAI WNALP

Best Arabidopsis Sequence Match ( AT1G33430.1 )
(BLAST)

001: MRAKAASGKA IIVLCLASFL AGSLFMSRTL SRSYIPEEED HHLTKHLSKH LEIQKDCDEH KRKLIESKSR DIIGEVSRTH QAVKSLERTM STLEMELAAA
101: RTSDRSSEFW SERSAKNQSR LQKVFAVIGI NTAFSSKKRR DSVRQTWMPT GEKLKKIEKE KGIVVRFVIG HSATPGGVLD KAIDEEDSEH KDFLRLKHIE
201: GYHQLSTKTR LYFSTATAMY DAEFYVKVDD DVHVNLGMLV TTLARYQSRP RIYIGCMKSG PVLSQKGVKY HEPEFWKFGE EGNKYFRHAT GQIYAISKDL
301: ATYISTNQGI LHRYANEDVS LGAWMLGLEV EHVDERSMCC GTPPDCQWKA QAGNVCAASF DWSCSGICKS VDRMARVHRA CAEGDTPLAN FRFFV

Arabidopsis Description

Hexosyltransferase [Source:UniProtKB/TrEMBL;Acc:F4HR76]
SUBAcon: [golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.