CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

nucleus 1
extracellular 4
endoplasmic reticulum 4
vacuole 6
plasma membrane 4
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra010198.1-P	Field mustard	vacuole	100.0	100.0
CDY67379	Canola	vacuole	99.49	99.49
AT1G33430.2	Thale cress	golgi, vacuole	93.91	91.81
KRH23776	Soybean	golgi, vacuole	67.01	69.84
KRH40026	Soybean	golgi	67.01	69.11
VIT_18s0089g01040.t01	Wine grape	endoplasmic reticulum, golgi	67.51	68.03
PGSC0003DMT400082760	Potato	golgi	67.26	66.58
Solyc11g042810.1.1	Tomato	golgi	66.5	66.5
HORVU1Hr1G065460.2	Barley	golgi	62.94	61.85
TraesCS1D01G267300.1	Wheat	golgi	62.69	61.6
TraesCS1A01G267200.1	Wheat	golgi	62.18	61.1
TraesCS1B01G278100.1	Wheat	golgi	62.18	61.1
KXG22053	Sorghum	golgi, plastid	62.69	60.84
GSMUA_Achr8P08420_001	Banana	cytosol	60.15	60.0
Os01t0877400-01	Rice	golgi	61.17	59.07
Os05t0427200-01	Rice	cytosol, golgi, plastid	62.69	58.81
CDX87501	Canola	golgi	57.11	58.75
CDX96559	Canola	cytosol, nucleus, peroxisome	52.03	58.74
CDX88390	Canola	golgi	56.85	58.64
GSMUA_Achr11P...	Banana	golgi	61.42	58.45
TraesCS3A01G389200.1	Wheat	golgi, mitochondrion	59.64	58.31
CDX93812	Canola	golgi	57.36	57.8
TraesCS3B01G419800.1	Wheat	golgi	59.39	57.64
TraesCS3D01G380700.1	Wheat	mitochondrion	59.14	56.97
Zm00001d012234_P002	Maize	mitochondrion	60.91	56.74
CDX97371	Canola	cytosol, endoplasmic reticulum	58.12	56.54
CDX92791	Canola	cytosol	57.11	55.97
CDY04694	Canola	golgi	53.05	55.88
CDY14294	Canola	cytosol, golgi	57.36	55.66
CDY30641	Canola	golgi	52.79	55.62
CDY46675	Canola	cytosol	57.36	55.12
CDY38836	Canola	golgi	54.31	54.87
CDY46836	Canola	plastid	56.35	54.55
CDY49507	Canola	plastid	56.09	53.9
CDY48266	Canola	golgi	55.84	53.79
CDY12206	Canola	golgi	55.58	53.55
CDY00412	Canola	golgi	53.55	53.15
CDY49800	Canola	mitochondrion	52.03	52.43
CDX97981	Canola	mitochondrion	51.52	51.92
CDY54843	Canola	golgi	57.61	51.83
CDY01303	Canola	golgi	49.49	50.52
CDY11037	Canola	golgi, mitochondrion, plastid	44.67	49.03
CDY68943	Canola	golgi	43.91	49.01
OQU87975	Sorghum	cytosol	55.58	43.71
CDX96213	Canola	mitochondrion	34.52	40.6
CDY49171	Canola	mitochondrion	34.01	40.0
CDY35642	Canola	mitochondrion	34.26	39.94
CDY14386	Canola	mitochondrion	34.26	39.82
CDY58927	Canola	cytosol	31.47	36.05
CDY11534	Canola	plastid	31.47	35.94
CDX75222	Canola	plastid	31.22	35.34
CDX68818	Canola	plastid	31.22	35.24
CDY42221	Canola	cytosol	10.66	32.31
CDY25866	Canola	mitochondrion	26.65	30.17
CDX75799	Canola	mitochondrion	25.89	29.82
CDY55849	Canola	mitochondrion	26.14	29.6
CDY55848	Canola	mitochondrion	26.14	29.6
CDX97620	Canola	mitochondrion	25.38	29.24
CDX82456	Canola	mitochondrion	25.38	29.24
CDX98518	Canola	mitochondrion	25.38	28.49
CDY35316	Canola	plastid	25.13	27.27
CDX77030	Canola	plastid	24.87	27.0

Protein Annotations

MapMan:21.4.1.1.5.3	Gene3D:3.90.550.50	GO:A0A078CEA6	EnsemblPlants:CDX73278	ProteinID:CDX73278	ProteinID:CDX73278.1
ncoils:Coil	InterPro:DUF4094	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005975
GO:GO:0006464	GO:GO:0006486	GO:GO:0008150	GO:GO:0008152	GO:GO:0008378	GO:GO:0009058
GO:GO:0009987	GO:GO:0016020	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00106340001	InterPro:Glyco_trans_31
PFAM:PF01762	PFAM:PF13334	PANTHER:PTHR11214	PANTHER:PTHR11214:SF147	TMHMM:TMhelix	UniPathway:UPA00378
UniParc:UPI000253F84A	SEG:seg	:	:	:	:

Description

BnaC05g28280D

Coordinates

chrLK031798:-:653285..655542

Molecular Weight (calculated)

44518.3 Da

IEP (calculated)

9.050

GRAVY (calculated)

-0.431

Length

394 amino acids

Sequence
(BLAST)

001: MRPKAASGKA IIVLCLASFL AGSLFMSRSL SRSYVSEEED KHLAKHLSKR LEVQKDCDEH KRKLIESKSR DIIGEVSKTH QAVKALERTM STLELELAAG
101: RTSHRNSEFW SEKSAKNQSL QKAFAVIGIN TAFSSKKRRD SVRQTWMPTG EKLKKIEKEK GIVVRFVIGH SATPGGVLDK AIDEEDLEHK DFLRLKHIEG
201: YHQLSTKTRL YFSTAAAMWD AEFYVKVDDD VHVNLGMLVT TLARYQSRPR VYIGCMKSGP VLSQKGVKYH EPEFWKFGEE GNKYFRHATG QIYAISKDLA
301: AYISTNQGIL HRYANEDVSL GAWMLGLEVE HVDERSMCCG TPPDCQWKAQ AGNVCAASFD WSCSGICKSV DRMTRVHRAC AEGDTPLSNF RFFF

Best Arabidopsis Sequence Match ( AT1G33430.1 )
(BLAST)

001: MRAKAASGKA IIVLCLASFL AGSLFMSRTL SRSYIPEEED HHLTKHLSKH LEIQKDCDEH KRKLIESKSR DIIGEVSRTH QAVKSLERTM STLEMELAAA
101: RTSDRSSEFW SERSAKNQSR LQKVFAVIGI NTAFSSKKRR DSVRQTWMPT GEKLKKIEKE KGIVVRFVIG HSATPGGVLD KAIDEEDSEH KDFLRLKHIE
201: GYHQLSTKTR LYFSTATAMY DAEFYVKVDD DVHVNLGMLV TTLARYQSRP RIYIGCMKSG PVLSQKGVKY HEPEFWKFGE EGNKYFRHAT GQIYAISKDL
301: ATYISTNQGI LHRYANEDVS LGAWMLGLEV EHVDERSMCC GTPPDCQWKA QAGNVCAASF DWSCSGICKS VDRMARVHRA CAEGDTPLAN FRFFV

Arabidopsis Description

Hexosyltransferase [Source:UniProtKB/TrEMBL;Acc:F4HR76]
SUBAcon: [golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.