CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	golgi, mitochondrion, plastid
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY49171	Canola	mitochondrion	97.31	97.31
CDY14386	Canola	mitochondrion	94.03	92.92
CDY35642	Canola	mitochondrion	93.73	92.9
AT5G53340.1	Thale cress	mitochondrion	92.54	91.72
Bra022647.1-P	Field mustard	mitochondrion	94.93	78.91
KRH53422	Soybean	mitochondrion	70.15	68.51
KRH64518	Soybean	mitochondrion	70.15	68.51
GSMUA_Achr4P00940_001	Banana	mitochondrion	66.87	66.47
VIT_16s0050g02460.t01	Wine grape	mitochondrion	64.48	63.16
PGSC0003DMT400023412	Potato	mitochondrion	63.88	60.97
Os08t0386700-01	Rice	mitochondrion	61.19	59.77
EES13774	Sorghum	mitochondrion	61.19	59.25
HORVU7Hr1G063510.5	Barley	mitochondrion	60.3	58.38
TraesCS7A01G293200.1	Wheat	mitochondrion	60.0	58.26
TraesCS7D01G286500.1	Wheat	mitochondrion	60.0	58.26
TraesCS7B01G185900.1	Wheat	mitochondrion	59.1	57.39
Zm00001d050251_P002	Maize	mitochondrion	57.91	47.78
Zm00001d032267_P003	Maize	mitochondrion	54.63	45.07
CDY11534	Canola	plastid	42.69	41.45
CDX75222	Canola	plastid	42.39	40.8
CDY58927	Canola	cytosol	41.79	40.7
CDX68818	Canola	plastid	42.39	40.69
CDY12206	Canola	golgi	42.69	34.96
CDY48266	Canola	golgi	42.69	34.96
CDY46836	Canola	plastid	42.39	34.89
CDY67379	Canola	vacuole	40.9	34.77
CDY49507	Canola	plastid	42.39	34.63
CDY49800	Canola	mitochondrion	40.3	34.53
CDX73278	Canola	vacuole	40.6	34.52
CDX92791	Canola	cytosol	40.9	34.08
CDX97371	Canola	cytosol, endoplasmic reticulum	41.19	34.07
CDX93812	Canola	golgi	39.7	34.02
CDX97981	Canola	mitochondrion	39.7	34.02
CDY14294	Canola	cytosol, golgi	41.19	33.99
CDX96559	Canola	cytosol, nucleus, peroxisome	34.93	33.52
CDY46675	Canola	cytosol	40.6	33.17
CDY04694	Canola	golgi	37.01	33.16
CDX88390	Canola	golgi	37.61	32.98
CDY30641	Canola	golgi	36.72	32.89
CDY11037	Canola	golgi, mitochondrion, plastid	35.22	32.87
CDY68943	Canola	golgi	34.63	32.86
CDX87501	Canola	golgi	36.72	32.11
CDY38836	Canola	golgi	37.01	31.79
CDY54843	Canola	golgi	40.0	30.59
CDY00412	Canola	golgi	35.82	30.23
CDY01303	Canola	golgi	32.84	28.5
CDY42221	Canola	cytosol	9.85	25.38
CDX77030	Canola	plastid	26.27	24.24
CDY35316	Canola	plastid	25.97	23.97
CDX97620	Canola	mitochondrion	24.18	23.68
CDY25866	Canola	mitochondrion	24.48	23.56
CDY55849	Canola	mitochondrion	23.88	22.99
CDY55848	Canola	mitochondrion	23.88	22.99
CDX75799	Canola	mitochondrion	23.28	22.81
CDX82456	Canola	mitochondrion	23.28	22.81
CDX98518	Canola	mitochondrion	23.88	22.79

Protein Annotations

MapMan:18.1.2.1.2	GO:A0A078E9Z6	EnsemblPlants:CDX96213	ProteinID:CDX96213	ProteinID:CDX96213.1	ncoils:Coil
InterPro:DUF4094	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005975	GO:GO:0006464
GO:GO:0006486	GO:GO:0008150	GO:GO:0008152	GO:GO:0008378	GO:GO:0009058	GO:GO:0009987
GO:GO:0016020	GO:GO:0016740	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00102306001	InterPro:Glyco_trans_31	PFAM:PF01762
PFAM:PF13334	PANTHER:PTHR11214	PANTHER:PTHR11214:SF224	TMHMM:TMhelix	UniPathway:UPA00378	UniParc:UPI0004EB45C7
SEG:seg	:	:	:	:	:

Description

BnaC02g14380D

Coordinates

chrLK031893:-:706412..709073

Molecular Weight (calculated)

37315.6 Da

IEP (calculated)

9.063

GRAVY (calculated)

-0.274

Length

335 amino acids

Sequence
(BLAST)

001: MARKGTSMRL TSSRISSLLL SMFATFASFY VAGRLWQESQ TRVHLISELH RVTGQGKSAI SVDDTLKIIA CREQKKTLAA LEMELSAARQ QGFVPKHTDG
101: AETKKRPLVV IGIMTSLGNK KKRDAVRQAW MGTGASLKKI ETEKGVIARF VIGRSANKGD SMDKSIDAEN SQTDDFIILD DVVEAPEEAS KKVKLFFAYA
201: ADRWDAQFYA KANDNIYVNM DALGSTLAAL QGKPRAYIGC MKSGEVFSEP NQKWYEPEWW KFGDKKAYFR HAYGEMYVIT NALARFVSIN RDILHAYAHD
301: DVSTGSWFVG LDVKHVDEGK FCCSAWSSEA ICAGV

Best Arabidopsis Sequence Match ( AT5G53340.1 )
(BLAST)

001: MARKGSSIRL SSSRISTLLL FMFATFASFY VAGRLWQESQ TRVHLINELD RVTGQGKSAI SVDDTLKIIA CREQKKTLAA LEMELSSARQ EGFVSKSPKL
101: ADGTETKKRP LVVIGIMTSL GNKKKRDAVR QAWMGTGASL KKLESEKGVI ARFVIGRSAN KGDSMDKSID TENSQTDDFI ILDDVVEAPE EASKKVKLFF
201: AYAADRWDAQ FYAKAIDNIY VNIDALGTTL AAHLENPRAY IGCMKSGEVF SEPNHKWYEP EWWKFGDKKA YFRHAYGEMY VITHALARFV SINRDILHSY
301: AHDDVSTGSW FVGLDVKHVD EGKFCCSAWS SEAICAGV

Arabidopsis Description

HPTG1Hydroxyproline O-galactosyltransferase HPGT1 [Source:UniProtKB/Swiss-Prot;Acc:Q94F27]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.