CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi, plastid

Predictor Summary:

plastid 3
mitochondrion 4
golgi 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
CDY03088
CDY17621

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G26940.1	CDY03088	AT2G01950.1	19000166
AT4G26940.1	CDY17621	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY68943	Canola	golgi	91.64	93.2
Bra019081.1-P	Field mustard	cytosol	85.24	79.27
CDX92791	Canola	cytosol	86.63	77.36
CDY46675	Canola	cytosol	87.47	76.59
CDX97371	Canola	cytosol, endoplasmic reticulum	82.73	73.33
CDY14294	Canola	cytosol, golgi	81.89	72.41
AT4G26940.1	Thale cress	endoplasmic reticulum, golgi	81.34	71.74
VIT_19s0090g00560.t01	Wine grape	cytosol, golgi	66.57	59.01
Solyc07g064670.2.1	Tomato	nucleus	66.57	58.58
PGSC0003DMT400057471	Potato	golgi	66.57	58.58
CDY48266	Canola	golgi	64.62	56.72
CDY46836	Canola	plastid	64.07	56.51
CDY12206	Canola	golgi	64.35	56.48
PGSC0003DMT400071658	Potato	golgi	61.28	56.41
CDY49507	Canola	plastid	64.35	56.34
GSMUA_Achr7P00260_001	Banana	golgi	62.4	55.17
GSMUA_Achr4P33450_001	Banana	golgi	61.84	55.09
EER91307	Sorghum	golgi, peroxisome, plasma membrane	61.84	54.28
GSMUA_Achr4P23710_001	Banana	golgi	62.4	54.24
Os03t0577500-01	Rice	golgi, peroxisome, plastid	61.28	54.19
TraesCS7A01G330900.1	Wheat	cytosol, golgi, mitochondrion, plastid	59.61	53.5
TraesCS7D01G339200.1	Wheat	cytosol, golgi, mitochondrion, plastid	59.61	53.5
HORVU7Hr1G081720.2	Barley	cytosol	59.33	53.38
TraesCS7B01G241500.2	Wheat	cytosol, golgi, mitochondrion, nucleus	59.05	53.0
Zm00001d013804_P003	Maize	golgi, plastid, vacuole	60.72	52.4
CDX97981	Canola	mitochondrion	50.97	46.8
CDY49800	Canola	mitochondrion	50.42	46.29
CDX93812	Canola	golgi	50.14	46.04
CDX73278	Canola	vacuole	49.03	44.67
CDY67379	Canola	vacuole	49.03	44.67
CDX87501	Canola	golgi	47.35	44.39
CDX88390	Canola	golgi	46.52	43.72
CDX96559	Canola	cytosol, nucleus, peroxisome	41.23	42.41
CDY04694	Canola	golgi	43.73	41.98
CDY30641	Canola	golgi	43.45	41.71
CDY54843	Canola	golgi	50.42	41.32
CDY38836	Canola	golgi	43.73	40.26
CDY00412	Canola	golgi	43.18	39.04
CDY01303	Canola	golgi	39.0	36.27
CDX96213	Canola	mitochondrion	32.87	35.22
CDY14386	Canola	mitochondrion	33.15	35.1
CDY49171	Canola	mitochondrion	32.31	34.63
CDY35642	Canola	mitochondrion	32.59	34.62
CDX75222	Canola	plastid	30.08	31.03
CDX68818	Canola	plastid	30.08	30.95
CDY58927	Canola	cytosol	29.53	30.81
CDY11534	Canola	plastid	29.25	30.43
CDY35316	Canola	plastid	24.79	24.52
CDX77030	Canola	plastid	24.51	24.24
CDX82456	Canola	mitochondrion	22.84	23.98
CDX75799	Canola	mitochondrion	22.84	23.98
CDY55849	Canola	mitochondrion	22.56	23.28
CDY25866	Canola	mitochondrion	22.56	23.28
CDY55848	Canola	mitochondrion	22.56	23.28
CDX97620	Canola	mitochondrion	22.01	23.1
CDX98518	Canola	mitochondrion	22.28	22.79
CDY42221	Canola	cytosol	6.69	18.46

Protein Annotations

MapMan:35.1	GO:A0A078FDJ1	UniProt:A0A078FDJ1	EnsemblPlants:CDY11037	ProteinID:CDY11037	ProteinID:CDY11037.1
InterPro:DUF4094	GO:GO:0000139	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0005975	GO:GO:0006464	GO:GO:0006486
GO:GO:0008150	GO:GO:0008152	GO:GO:0008378	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00048992001	InterPro:Glyco_trans_31
PFAM:PF01762	PFAM:PF13334	PANTHER:PTHR11214	PANTHER:PTHR11214:SF5	UniPathway:UPA00378	UniParc:UPI0004EEA178
SEG:seg	:	:	:	:	:

Description

BnaA03g46960DHexosyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A078FDJ1]

Coordinates

chrLK032008:-:742860..745991

Molecular Weight (calculated)

40454.1 Da

IEP (calculated)

7.146

GRAVY (calculated)

-0.365

Length

359 amino acids

Sequence
(BLAST)

001: MRLFPMLLTQ SQRKTQQNVV KHHHHRGVEL SAASKSFVSK KRTFLLCIGF FCAGTLFYDR MWPEPEANVA SREAASDERL LLLSEDCDSS KTSLGEVYKS
101: PDATQTLDKT ISALEMELAA ARAAQESITN GSPVSDEFNL PETVTKRKYL MVFGINTAFN SRKRRDSVRT TWMPPSGERK KLEEEKGIVI HFVIGHSATP
201: GGILDRAIQA EEHKHGDSLR LDHVEGYLEL SAKTKSYFTT AFALWDAYFY VKVDDDVHVN IDTLGAEIAR YRTKPRVYIG CMKSGPVLAQ KGVRYHEPEE
301: LASYISINKN VLHKYVNEDV SFGSWFLGLD VEHVDDRRLC CGTTDCEWKA QAGNVCCVV

Best Arabidopsis Sequence Match ( AT4G26940.2 )
(BLAST)

001: MSLKHHHRGL ELSASKSFVS KKWTLFLCIG FFCAGILFSD RMWPEPESNV VSRDTVASDE RLRLESEDCD SSKKGLKRES KDILGDVYKS PDAIQTLDKT
101: ISKLETELAD ARAAQESIMN GSPVSDDFKL PETVTKRKYL MVVGVNTAFS SRKRRDSVRA TWMPPGEERK KLEEEKGIVM RFVIGHSSTP GGILDRAIQA
201: EESKHGDFLR LDHVEGYLEL SAKTKTYFTT AFAMWDADFY VKVDDDVHVN IATLGAELAR YRMKPRVYIG CMKSGPVLAQ KSALCNIQGV GVLHIDKPKR
301: TSQICE

Arabidopsis Description

B3GALT4Hexosyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A178V3W5]
SUBAcon: [endoplasmic reticulum,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.