Factsheet for GSMUA_Achr7P00260_001

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

nucleus 1
mitochondrion 3
golgi 2
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr2P15100_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G26940.1	GSMUA_Achr2P15100_001	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P33450_001	Banana	golgi	88.67	89.33
GSMUA_Achr4P23710_001	Banana	golgi	88.92	87.41
VIT_19s0090g00560.t01	Wine grape	cytosol, golgi	77.59	77.78
KRH26781	Soybean	golgi, plasma membrane	76.11	75.92
KRH22570	Soybean	golgi	75.86	75.68
VIT_12s0059g00640.t01	Wine grape	golgi	75.62	75.43
Os03t0577500-01	Rice	golgi, peroxisome, plastid	75.12	75.12
EER91307	Sorghum	golgi, peroxisome, plasma membrane	75.12	74.57
KRH56140	Soybean	golgi, mitochondrion	74.38	74.2
KRH25371	Soybean	golgi, mitochondrion	73.4	73.4
AT1G05170.2	Thale cress	cytosol, golgi	73.4	73.22
PGSC0003DMT400057471	Potato	golgi	73.4	73.04
Solyc07g064670.2.1	Tomato	nucleus	73.4	73.04
CDY46836	Canola	plastid	73.15	72.97
CDY49507	Canola	plastid	73.15	72.44
CDY48266	Canola	golgi	72.91	72.37
Bra005595.1-P	Field mustard	golgi	72.91	72.37
PGSC0003DMT400071658	Potato	golgi	69.46	72.31
HORVU7Hr1G081720.2	Barley	cytosol	70.94	72.18
CDY12206	Canola	golgi	72.41	71.88
Zm00001d013804_P003	Maize	golgi, plastid, vacuole	73.65	71.88
TraesCS7A01G330900.1	Wheat	cytosol, golgi, mitochondrion, plastid	70.69	71.75
TraesCS7B01G241500.2	Wheat	cytosol, golgi, mitochondrion, nucleus	70.69	71.75
AT2G32430.1	Thale cress	golgi	71.92	71.39
Solyc12g005880.1.1	Tomato	plastid	69.46	71.39
GSMUA_Achr5P00690_001	Banana	golgi	70.44	71.32
PGSC0003DMT400022537	Potato	plastid	69.7	71.28
TraesCS7D01G339200.1	Wheat	cytosol, golgi, mitochondrion, plastid	70.2	71.25
Solyc07g052320.2.1	Tomato	mitochondrion, plastid	71.43	71.08
PGSC0003DMT400074517	Potato	cytosol, golgi, mitochondrion, vacuole	71.43	71.08
CDX97371	Canola	cytosol, endoplasmic reticulum	70.69	70.86
Bra010422.1-P	Field mustard	cytosol, golgi	70.44	70.44
CDY14294	Canola	cytosol, golgi	70.44	70.44
AT4G26940.1	Thale cress	endoplasmic reticulum, golgi	70.44	70.27
CDY46675	Canola	cytosol	69.7	69.02
CDX92791	Canola	cytosol	68.23	68.91
Bra015395.1-P	Field mustard	plastid	71.67	68.31
Bra019081.1-P	Field mustard	cytosol	64.29	67.62
GSMUA_Achr9P30290_001	Banana	cytosol	69.7	67.06
GSMUA_Achr5P23050_001	Banana	cytosol, golgi, mitochondrion, plastid	62.07	63.0
CDY11037	Canola	golgi, mitochondrion, plastid	55.17	62.4
CDY68943	Canola	golgi	54.19	62.32
GSMUA_Achr8P08420_001	Banana	cytosol	54.68	56.2
GSMUA_Achr8P23200_001	Banana	golgi	58.87	55.97
GSMUA_Achr11P...	Banana	golgi	53.69	52.66
GSMUA_Achr4P00940_001	Banana	mitochondrion	32.76	39.47
GSMUA_Achr8P24200_001	Banana	cytosol	31.53	35.56
GSMUA_Achr7P14080_001	Banana	golgi, plastid	26.85	31.69
GSMUA_Achr10P...	Banana	mitochondrion	22.41	29.55
GSMUA_Achr6P05430_001	Banana	endoplasmic reticulum, nucleus, plastid	26.35	28.46

Protein Annotations

MapMan:21.4.1.1.5.3	Gene3D:3.90.550.50	ncoils:Coil	InterPro:DUF4094	GO:GO:0000139	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794
GO:GO:0005975	GO:GO:0006464	GO:GO:0006486	GO:GO:0008150	GO:GO:0008152	GO:GO:0008378
GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016757
GO:GO:0019538	EnsemblPlantsGene:GSMUA_Achr7G00260_001	EnsemblPlants:GSMUA_Achr7P00260_001	EnsemblPlants:GSMUA_Achr7T00260_001	InterPro:Glyco_trans_31	UniProt:M0TDG6
PFAM:PF01762	PFAM:PF13334	PANTHER:PTHR11214	PANTHER:PTHR11214:SF5	UniParc:UPI0002954E73	SEG:seg

Description

Probable beta-1,3-galactosyltransferase 2 [Source:GMGC_GENE;Acc:GSMUA_Achr7G00260_001]

Coordinates

chr7:-:234497..238315

Molecular Weight (calculated)

45412.2 Da

IEP (calculated)

7.897

GRAVY (calculated)

-0.386

Length

406 amino acids

Sequence
(BLAST)

001: MSFKRGSGGG GELWARGKVP KKWTFLLCLG SFCAGLLFAN SWKMPEAKDI IRTSGTEDKL NLVANDCNPR IINEKPEPKD ILNGVSNAQE VIQTLDKTIS
101: DLEMELAAAR ATQESILNGA PLSETLKAAE ATGRRKYLMV VGINTAFSSR RRRDSVRATW MPQGEKRKKL EEERGIIIRF VIGHSATSGG ILDKAIEAEH
201: RKHGDLMRLD HIEGYLELSA KTKSYFATAV SMWDADFYIK VDDDVHVNIA TLGTTLAKHR SKPRVYIGCM KSGPVLAQKG VRYHEPEYWK FGEDGNKYFR
301: HATGQLYAIS NDLAAYISMN QHVLHKYANE DVSLGSWFIG LDVEHIDDRR LCCGTPPDCE WKAQAGNICV ASFDWTCSGI CNSAERINEV HRRCGEGEKM
401: VWDAVF

Best Arabidopsis Sequence Match ( AT1G05170.2 )
(BLAST)

001: MSAKIKGEYS SRSFVSRKWT ILLCLGSFCV GMFFTNRMWN IPESKGMSHP SVTEAERLKL VSEGCNPKAL YQKEVKRDPQ ALFGEVANTH IALQTLDKTI
101: SSLEMELAAA RSVQESLQNG APLSDDMGKK QPQEQRRFLM VVGINTAFSS RKRRDSIRAT WMPQGEKRKR LEEEKGIIIR FVIGHSATTG GILDRAIEAE
201: DRKHGDFLRL DHVEGYLELS GKTKTYFSTA FSMWDADFYV KVDDDVHVNI ATLGETLVRH RKKPRVYIGC MKSGPVLSQK GVRYHEPEYW KFGENGNKYF
301: RHATGQLYAI SRDLASYISI NQHVLHKYAN EDVSLGAWFI GIDVKHIDDR RLCCGTPPDC EWKAQAGNIC VASFDWSCSG ICRSADRIKE VHRRCGEGEK
401: ALWSATF

Arabidopsis Description

B3GALT2Hexosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q3U9]
SUBAcon: [golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.