CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi

Predictor Summary:

plastid 3
mitochondrion 4
golgi 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH25371	Soybean	golgi, mitochondrion	97.3	97.54
KRH26781	Soybean	golgi, plasma membrane	86.24	86.24
KRH22570	Soybean	golgi	85.5	85.5
VIT_12s0059g00640.t01	Wine grape	golgi	83.29	83.29
AT1G05170.2	Thale cress	cytosol, golgi	78.38	78.38
CDY49507	Canola	plastid	78.87	78.29
CDY46836	Canola	plastid	78.13	78.13
Solyc07g052320.2.1	Tomato	mitochondrion, plastid	77.89	77.7
PGSC0003DMT400074517	Potato	cytosol, golgi, mitochondrion, vacuole	77.89	77.7
PGSC0003DMT400022537	Potato	plastid	74.94	76.83
Bra005595.1-P	Field mustard	golgi	76.9	76.53
CDY48266	Canola	golgi	76.9	76.53
AT2G32430.1	Thale cress	golgi	76.41	76.04
Solyc12g005880.1.1	Tomato	plastid	73.46	75.7
CDY12206	Canola	golgi	75.92	75.55
GSMUA_Achr4P33450_001	Banana	golgi	74.2	74.94
GSMUA_Achr4P23710_001	Banana	golgi	75.92	74.82
GSMUA_Achr7P00260_001	Banana	golgi	74.2	74.38
Bra015395.1-P	Field mustard	plastid	75.92	72.54
EER91307	Sorghum	golgi, peroxisome, plasma membrane	72.73	72.37
KRH02065	Soybean	golgi, mitochondrion	65.85	71.66
Os03t0577500-01	Rice	golgi, peroxisome, plastid	71.25	71.43
KRH51094	Soybean	cytosol	60.2	71.01
HORVU7Hr1G081720.2	Barley	cytosol	69.53	70.93
TraesCS7B01G241500.2	Wheat	cytosol, golgi, mitochondrion, nucleus	69.53	70.75
TraesCS7D01G339200.1	Wheat	cytosol, golgi, mitochondrion, plastid	69.04	70.25
TraesCS7A01G330900.1	Wheat	cytosol, golgi, mitochondrion, plastid	69.04	70.25
Zm00001d013804_P003	Maize	golgi, plastid, vacuole	71.74	70.19
KRH18826	Soybean	endoplasmic reticulum	63.39	64.99
KRH16620	Soybean	mitochondrion	62.41	63.98
KRH64756	Soybean	golgi	62.41	63.98
KRH53153	Soybean	vacuole	61.67	63.71
KRH23776	Soybean	golgi, vacuole	54.3	58.47
KRH40026	Soybean	golgi	54.55	58.12
KRH53422	Soybean	mitochondrion	35.38	41.98
KRH27862	Soybean	mitochondrion	35.14	41.69
KRH64518	Soybean	mitochondrion	34.64	41.11
KRH05191	Soybean	mitochondrion, plastid	29.73	37.93
KRH15831	Soybean	mitochondrion	33.66	34.34
KRH21986	Soybean	mitochondrion	25.8	31.25
KRH55102	Soybean	plastid	24.82	29.88
KRH26222	Soybean	plastid	24.57	29.59

Protein Annotations

EntrezGene:100794838	MapMan:21.4.1.1.5.3	Gene3D:3.90.550.50	EMBL:ACUP02004100	ncoils:Coil	InterPro:DUF4094
EnsemblPlantsGene:GLYMA_06G306000	GO:GO:0000139	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0005975	GO:GO:0006464	GO:GO:0006486
GO:GO:0008150	GO:GO:0008152	GO:GO:0008378	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	GO:GO:0019538	InterPro:Glyco_trans_31	UniProt:I1KFD4
EnsemblPlants:KRH56140	ProteinID:KRH56140	ProteinID:KRH56140.1	PFAM:PF01762	PFAM:PF13334	PANTHER:PTHR11214
PANTHER:PTHR11214:SF5	TMHMM:TMhelix	UniParc:UPI000233A777	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:49494803..49500145

Molecular Weight (calculated)

46012.8 Da

IEP (calculated)

8.591

GRAVY (calculated)

-0.412

Length

407 amino acids

Sequence
(BLAST)

001: MTWKSRGELP SRSVISQRWV LFLCLGSFCA GMLFTTRIWT IPENNKGLAR PTASEAEKLS LVSEGCNSRI LQEMEMKRDK DIYGEVFKSH NSIQTLDKTI
101: SNLEMELAAA RVTQESLRSG APISDDIRLS ESSSGKRKYL MVVGINTAFS SRKRRDSVRA TWMPQGEKRK KLEEKGIIMR FVIGHSATSG GILDRAIEAE
201: DRKHGDFLRL NHVEGYLELS AKTKTYFATA VNLWDADFYV KVDDDVHVNI ATLGQTLVRH RSKPRIYIGC MKSGPVLSQK GVRYHEPEYW KFGEAGNRYF
301: RHATGQLYAI SNDLATYISI NQNVLHKYAN EDVSLGSWFI GLDVEHIDDR RLCCGTPPDC EWKAQAGNIC VASFDWSCSG ICRSAERIKE VHRRCGEGEN
401: ALWSASF

Best Arabidopsis Sequence Match ( AT1G05170.2 )
(BLAST)

001: MSAKIKGEYS SRSFVSRKWT ILLCLGSFCV GMFFTNRMWN IPESKGMSHP SVTEAERLKL VSEGCNPKAL YQKEVKRDPQ ALFGEVANTH IALQTLDKTI
101: SSLEMELAAA RSVQESLQNG APLSDDMGKK QPQEQRRFLM VVGINTAFSS RKRRDSIRAT WMPQGEKRKR LEEEKGIIIR FVIGHSATTG GILDRAIEAE
201: DRKHGDFLRL DHVEGYLELS GKTKTYFSTA FSMWDADFYV KVDDDVHVNI ATLGETLVRH RKKPRVYIGC MKSGPVLSQK GVRYHEPEYW KFGENGNKYF
301: RHATGQLYAI SRDLASYISI NQHVLHKYAN EDVSLGAWFI GIDVKHIDDR RLCCGTPPDC EWKAQAGNIC VASFDWSCSG ICRSADRIKE VHRRCGEGEK
401: ALWSATF

Arabidopsis Description

B3GALT2Hexosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q3U9]
SUBAcon: [golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.