Factsheet for PGSC0003DMT400074517

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi, vacuole, cytosol

Predictor Summary:

plastid 2
mitochondrion 2
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi, mitochondrion, vacuole
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	golgi
Plant-mPloc:	plastid
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	vacuole
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g052320.2.1	Tomato	mitochondrion, plastid	97.79	97.79
PGSC0003DMT400022537	Potato	plastid	81.62	83.88
VIT_12s0059g00640.t01	Wine grape	golgi	80.39	80.59
KRH26781	Soybean	golgi, plasma membrane	79.66	79.85
KRH22570	Soybean	golgi	79.17	79.36
CDY49507	Canola	plastid	78.68	78.29
AT1G05170.2	Thale cress	cytosol, golgi	77.7	77.89
CDY46836	Canola	plastid	77.7	77.89
KRH56140	Soybean	golgi, mitochondrion	77.7	77.89
AT2G32430.1	Thale cress	golgi	77.7	77.51
CDY12206	Canola	golgi	77.45	77.26
KRH25371	Soybean	golgi, mitochondrion	76.72	77.09
Bra005595.1-P	Field mustard	golgi	77.21	77.02
CDY48266	Canola	golgi	77.21	77.02
PGSC0003DMT400057471	Potato	golgi	75.49	75.49
PGSC0003DMT400071658	Potato	golgi	71.32	74.62
Bra015395.1-P	Field mustard	plastid	76.72	73.47
GSMUA_Achr4P33450_001	Banana	golgi	71.81	72.7
Os03t0577500-01	Rice	golgi, peroxisome, plastid	71.81	72.17
EER91307	Sorghum	golgi, peroxisome, plasma membrane	72.06	71.88
TraesCS7D01G339200.1	Wheat	cytosol, golgi, mitochondrion, plastid	70.34	71.75
TraesCS7B01G241500.2	Wheat	cytosol, golgi, mitochondrion, nucleus	70.34	71.75
GSMUA_Achr7P00260_001	Banana	golgi	71.08	71.43
HORVU7Hr1G081720.2	Barley	cytosol	69.61	71.18
TraesCS7A01G330900.1	Wheat	cytosol, golgi, mitochondrion, plastid	69.61	71.0
GSMUA_Achr4P23710_001	Banana	golgi	71.81	70.94
Zm00001d013804_P003	Maize	golgi, plastid, vacuole	70.34	68.99
PGSC0003DMT400071429	Potato	golgi	63.24	65.15
PGSC0003DMT400075526	Potato	cytosol	51.47	64.22
PGSC0003DMT400075963	Potato	golgi	59.56	61.36
PGSC0003DMT400082760	Potato	golgi	57.11	58.54
PGSC0003DMT400032067	Potato	cytosol, mitochondrion	34.56	45.05
PGSC0003DMT400023412	Potato	mitochondrion	34.8	40.46
PGSC0003DMT400051332	Potato	extracellular, plasma membrane, vacuole	17.65	31.86
PGSC0003DMT400054913	Potato	golgi, mitochondrion	26.23	30.75
PGSC0003DMT400032365	Potato	plastid	25.98	30.29
PGSC0003DMT400050795	Potato	vacuole	13.24	23.58

Protein Annotations

EntrezGene:102586590	MapMan:21.4.1.1.5.3	Gene3D:3.90.550.50	ncoils:Coil	InterPro:DUF4094	GO:GO:0000139
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005794	GO:GO:0005975	GO:GO:0006464	GO:GO:0006486	GO:GO:0008150	GO:GO:0008152
GO:GO:0008378	GO:GO:0009058	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740
GO:GO:0016757	GO:GO:0019538	InterPro:Glyco_trans_31	UniProt:M1CTT4	PFAM:PF01762	PFAM:PF13334
EnsemblPlantsGene:PGSC0003DMG400028961	PGSC:PGSC0003DMG400028961	EnsemblPlants:PGSC0003DMT400074517	PANTHER:PTHR11214	PANTHER:PTHR11214:SF208	TMHMM:TMhelix
UniParc:UPI00029610A1	RefSeq:XP_006366586.1	SEG:seg	:	:	:

Description

Galactosyltransferase family protein [Source:PGSC_GENE;Acc:PGSC0003DMG400028961]

Coordinates

chr7:-:46902905..46906993

Molecular Weight (calculated)

45751.9 Da

IEP (calculated)

9.061

GRAVY (calculated)

-0.352

Length

408 amino acids

Sequence
(BLAST)

001: MSFKNRVEGT SRSVISQKWI LFLCISSFCA GMFFTARMWT IPDAKGGITR TTGVEAERLN LVSEGCNTKF LQQKDVKLVS KDVFGEVSKT HNALQTLDKT
101: ISSLEMELAA AKSAQESILS GAPISGDSEK GDSPKKRKYF MVVGINTAFS SRKRRDSVRA TWMPQGEKRK KLEEEKGIIM RFVIGHGATL GGILDRAIEA
201: EDRNHGDFLR LDHVEGYLEL SAKTKTYFAT AVKLWDAEYY VKVDDDVHVN IGTLAETLAR HRKKPRVYIG CMKSGPVLAQ KGVRYHEPEY WKFGETGNKY
301: FRHATGQIYA ISKDLASYIS VNQHVLHKYA NEDVSLGAWF IGLDVLHIDD RRLCCGTPPD CEWKAQAGNV CVASFDWTCS GICRSVDRLK EVHKRCGEGE
401: KALWKAAI

Best Arabidopsis Sequence Match ( AT1G05170.2 )
(BLAST)

001: MSAKIKGEYS SRSFVSRKWT ILLCLGSFCV GMFFTNRMWN IPESKGMSHP SVTEAERLKL VSEGCNPKAL YQKEVKRDPQ ALFGEVANTH IALQTLDKTI
101: SSLEMELAAA RSVQESLQNG APLSDDMGKK QPQEQRRFLM VVGINTAFSS RKRRDSIRAT WMPQGEKRKR LEEEKGIIIR FVIGHSATTG GILDRAIEAE
201: DRKHGDFLRL DHVEGYLELS GKTKTYFSTA FSMWDADFYV KVDDDVHVNI ATLGETLVRH RKKPRVYIGC MKSGPVLSQK GVRYHEPEYW KFGENGNKYF
301: RHATGQLYAI SRDLASYISI NQHVLHKYAN EDVSLGAWFI GIDVKHIDDR RLCCGTPPDC EWKAQAGNIC VASFDWSCSG ICRSADRIKE VHRRCGEGEK
401: ALWSATF

Arabidopsis Description

B3GALT2Hexosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8Q3U9]
SUBAcon: [golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.