Factsheet for PGSC0003DMT400032067

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 2
cytosol 2
plastid 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g081920.2.1	Tomato	nucleus	96.81	88.34
VIT_02s0025g01010.t01	Wine grape	mitochondrion	75.4	69.21
GSMUA_Achr4P00940_001	Banana	mitochondrion	68.69	63.8
KRH27862	Soybean	mitochondrion	69.01	62.97
Os08t0386700-01	Rice	mitochondrion	67.41	61.52
EES13774	Sorghum	mitochondrion	67.09	60.69
TraesCS7D01G286500.1	Wheat	mitochondrion	66.77	60.58
TraesCS7A01G293200.1	Wheat	mitochondrion	66.77	60.58
HORVU7Hr1G063510.5	Barley	mitochondrion	66.45	60.12
PGSC0003DMT400023412	Potato	mitochondrion	67.41	60.11
TraesCS7B01G185900.1	Wheat	mitochondrion	65.81	59.71
Zm00001d050251_P002	Maize	mitochondrion	63.58	49.01
Zm00001d032267_P003	Maize	mitochondrion	59.42	45.81
PGSC0003DMT400075526	Potato	cytosol	39.94	38.23
PGSC0003DMT400071658	Potato	golgi	45.05	36.15
PGSC0003DMT400082760	Potato	golgi	45.69	35.93
PGSC0003DMT400071429	Potato	golgi	44.73	35.35
PGSC0003DMT400074517	Potato	cytosol, golgi, mitochondrion, vacuole	45.05	34.56
PGSC0003DMT400057471	Potato	golgi	44.41	34.07
PGSC0003DMT400075963	Potato	golgi	42.81	33.84
PGSC0003DMT400022537	Potato	plastid	42.49	33.5
PGSC0003DMT400054913	Potato	golgi, mitochondrion	26.52	23.85
PGSC0003DMT400032365	Potato	plastid	25.56	22.86
PGSC0003DMT400051332	Potato	extracellular, plasma membrane, vacuole	15.34	21.24
PGSC0003DMT400050795	Potato	vacuole	13.1	17.9

Protein Annotations

MapMan:18.1.2.1.2	ncoils:Coil	GO:GO:0000139	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794	GO:GO:0005975	GO:GO:0006464
GO:GO:0006486	GO:GO:0008150	GO:GO:0008152	GO:GO:0008378	GO:GO:0009058	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	GO:GO:0019538	InterPro:Glyco_trans_31
UniProt:M1AWT1	PFAM:PF01762	EnsemblPlantsGene:PGSC0003DMG400012309	PGSC:PGSC0003DMG400012309	EnsemblPlants:PGSC0003DMT400032067	PANTHER:PTHR11214
PANTHER:PTHR11214:SF224	UniParc:UPI0002955D7B	:	:	:	:

Description

Beta 1,3-glycosyltransferase I [Source:PGSC_GENE;Acc:PGSC0003DMG400012309]

Coordinates

chr8:+:55557937..55564956

Molecular Weight (calculated)

35320.7 Da

IEP (calculated)

8.441

GRAVY (calculated)

-0.470

Length

313 amino acids

Sequence
(BLAST)

001: MAALYVAGRL WLDSENRVYL IQELDRRTGQ GRSAISVDDT LKIITCREQQ KRLTALQMEL GKASQEGFVS KHLLDNNEKD SKKKLLAVIG VSTNFGNKKN
101: RDAIRKAWMP TGPARKKLEE EKGIVIRFVI GRSLNRGDSS DRAIDDESRN SNDFIILNDH VESPQEQSKK TKSFFAHAVE HWDAEFYAKV NDNVYVNLDA
201: IGAVLTSYLD KPRAYIGCMK SGEVFSQSEQ KWYEPEWWKF GDGKSYFRHA SGEIFAISKA LAQFISINRS ILRSYAHDDV SAGSWFIGLD VKYVDEGKFC
301: CSSWSSGSVC AAA

Best Arabidopsis Sequence Match ( AT5G53340.1 )
(BLAST)

001: MARKGSSIRL SSSRISTLLL FMFATFASFY VAGRLWQESQ TRVHLINELD RVTGQGKSAI SVDDTLKIIA CREQKKTLAA LEMELSSARQ EGFVSKSPKL
101: ADGTETKKRP LVVIGIMTSL GNKKKRDAVR QAWMGTGASL KKLESEKGVI ARFVIGRSAN KGDSMDKSID TENSQTDDFI ILDDVVEAPE EASKKVKLFF
201: AYAADRWDAQ FYAKAIDNIY VNIDALGTTL AAHLENPRAY IGCMKSGEVF SEPNHKWYEP EWWKFGDKKA YFRHAYGEMY VITHALARFV SINRDILHSY
301: AHDDVSTGSW FVGLDVKHVD EGKFCCSAWS SEAICAGV

Arabidopsis Description

HPTG1Hydroxyproline O-galactosyltransferase HPGT1 [Source:UniProtKB/Swiss-Prot;Acc:Q94F27]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.